LOCUS BC020769 1131 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glucosamine-6-phosphate deaminase 1, mRNA (cDNA clone
MGC:22665 IMAGE:4242886), complete cds.
ACCESSION BC020769
VERSION BC020769.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1131)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1131)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: a Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281953.
FEATURES Location/Qualifiers
source 1..1131
/db_xref="H-InvDB:HIT000038950"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22665 IMAGE:4242886"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1131
/gene="GNPDA1"
/gene_synonym="GNPDA"
/gene_synonym="GPI"
/gene_synonym="HLN"
/gene_synonym="KIAA0060"
/db_xref="GeneID:10007"
/db_xref="HGNC:HGNC:4417"
/db_xref="MIM:601798"
CDS 40..909
/gene="GNPDA1"
/gene_synonym="GNPDA"
/gene_synonym="GPI"
/gene_synonym="HLN"
/gene_synonym="KIAA0060"
/codon_start=1
/product="glucosamine-6-phosphate deaminase 1"
/protein_id="AAH20769.1"
/db_xref="GeneID:10007"
/db_xref="HGNC:HGNC:4417"
/db_xref="MIM:601798"
/translation="MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGST
PLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPE
NTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVK
TLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEE
GVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKE
TEKSQSSKKPYSD"
BASE COUNT 315 a 256 c 298 g 262 t
ORIGIN
1 gcagtcgctg cagccgccgc gggaggcgtc cgtgacaaga tgaagctcat catcctggag
61 cactattctc aggcgagcga gtgggcggct aaatacatca ggaaccgtat catccagttt
121 aacccagggc cagagaagta cttcaccctg gggctcccca ctgggagtac cccacttggc
181 tgctacaaga agctgattga atactataag aatggggacc tgtcctttaa atatgtgaag
241 accttcaaca tggatgagta cgtgggcctt cctcgagacc acccggagag ttaccactcc
301 ttcatgtgga acaacttctt caagcacatt gacatccacc cagaaaacac ccacattctg
361 gatgggaatg cagtcgacct acaggcagaa tgtgatgcct ttgaagagaa gatcaaggct
421 gcaggtggga tcgagctatt tgttggaggc atcggccctg atggacacat tgccttcaac
481 gagccaggct ccagtctggt gtccaggacc cgtgtgaaga cgctggccat ggataccatc
541 ctggccaatg ctaggttctt cgatggagaa ctcaccaagg tgcccaccat ggccttgacg
601 gtgggggtgg gcactgtcat ggatgctaga gaggtgatga tccttatcac aggtgctcac
661 aaggcatttg ctctgtacaa ggccatcgag gagggagtga accacatgtg gaccgtgtct
721 gccttccagc agcatccccg caccgtgttt gtgtgtgacg aggatgccac cttggagctg
781 aaagtgaaga ctgtcaagta tttcaaaggt ttaatgcttg ttcataacaa gttggtggac
841 cccttgtaca gtatcaaaga gaaagaaact gagaaaagcc aatcttcgaa gaaaccatac
901 agcgattagc ctgtgctggg acctagtgtc aagtacccat agggaaaggc aggtctttct
961 ggaaattgtc tttagaagaa agaattgtat ttctttaatc tagtatggtt actccagata
1021 agtgggtgaa cttattgttc ttggccatga ggctgggagc ctagtcacgg agtttagcta
1081 tagggagaat gtttgtaact taatcaaaaa aaaaaaaaaa aaaaaaaaaa a
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