LOCUS BC020750 1338 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens serine dehydratase, mRNA (cDNA clone MGC:22597
IMAGE:4662951), complete cds.
ACCESSION BC020750
VERSION BC020750.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1338)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1338)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5803160.
FEATURES Location/Qualifiers
source 1..1338
/db_xref="H-InvDB:HIT000038935"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22597 IMAGE:4662951"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1338
/gene="SDS"
/gene_synonym="SDH"
/db_xref="GeneID:10993"
/db_xref="MIM:182128"
CDS 122..778
/gene="SDS"
/gene_synonym="SDH"
/codon_start=1
/product="SDS protein"
/protein_id="AAH20750.1"
/db_xref="GeneID:10993"
/db_xref="MIM:182128"
/translation="MMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRG
IGHFCKRWAKQGCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPSTTPALTIERLKNE
GATVKVVGELLDEAFELAKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLWEKP
GAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITR
"
misc_feature 146..766
/gene="SDS"
/gene_synonym="SDH"
/note="IlvA; Region: Threonine dehydratase [Amino acid
transport and metabolism]"
/db_xref="CDD:COG1171"
BASE COUNT 317 a 381 c 380 g 260 t
ORIGIN
1 accattcaga agactgtcca cccgtcctca gccccctctc ttcgtgggct atctactcag
61 ttgatccctc cctcgctggc ttggctctga ctcctgctca gacccatcac ctttgccggg
121 aatgatgtct ggagaacccc tgcacgtgaa gacccccatc cgtgacagca tggccctgtc
181 caaaatggcc ggcaccagcg tctacctcaa gatggacagt gcccagccct ccggctcctt
241 caagatccgg ggcattgggc acttctgcaa gaggtgggcc aagcaaggct gtgcacattt
301 tgtctgctcc tcggcgggca acgcaggcat ggcggctgca tatgcggcca ggcaactcgg
361 cgtccccgcc accatcgtgg tgcccagcac cacacctgct ctcaccattg agcgcctcaa
421 gaatgaaggt gccacagtca aggtggtggg tgagttattg gatgaagcct tcgagctggc
481 caaggcccta gcgaagaaca acccgggttg ggtctacatt cccccctttg atgaccccct
541 catctgggaa ggccacgctt ccatcgtgaa agagctgaag gagacactgt gggaaaagcc
601 gggggccatc gcgctgtcag tgggcggcgg gggcctgctg tgtggagtgg tccaggggct
661 gcaggaggtg ggctgggggg acgtgcctgt catcgccatg gagacttttg gtgcccacag
721 cttccacgct gccaccaccg caggcaaact tgtctccctg cccaagatca ccaggtgagc
781 agctggggtg cctccctcgg gtgtccagca agcactgggg agtccccctt agggctggct
841 ttgagataga tcctgatgtc agcctgtttc acagatgaga caatggaggc tttgatcgct
901 tgcccagggc cacgtccagt gagtggtaca gcttggactc aaacccaagt ctgtgtgact
961 ccaacatgtc acacttcctc acgtgaaaag cctcatatga ggctgggcgc ggtgacttgt
1021 gcctgtaatc ccagcacttt ggaaggccga ggggggtgga tcacctaggg tcaggagttc
1081 gaggccagcc tggtcaacat agtgaagccc catctctact aaaaatacaa aaattggccg
1141 ggtgtggtgg tgggcacctg tagtcccagc tactcggtag gctgaggctg gagaattgct
1201 tgaacccggg aggcagagat tgcagtgagc tgagatcgca ccactgcact ccagcctggg
1261 caacagagca agactccgtc taaaaaaaaa aaaaaacaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaa
//