LOCUS BC020740 1220 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sarcoglycan, delta (35kDa dystrophin-associated
glycoprotein), mRNA (cDNA clone MGC:22567 IMAGE:4702959), complete
cds.
ACCESSION BC020740
VERSION BC020740.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1220)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46249398.
FEATURES Location/Qualifiers
source 1..1220
/db_xref="H-InvDB:HIT000038928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22567 IMAGE:4702959"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1220
/gene="SGCD"
/gene_synonym="35DAG"
/gene_synonym="CMD1L"
/gene_synonym="DAGD"
/gene_synonym="MGC22567"
/gene_synonym="SG-delta"
/gene_synonym="SGCDP"
/gene_synonym="SGD"
/db_xref="GeneID:6444"
/db_xref="HGNC:HGNC:10807"
/db_xref="MIM:601411"
CDS 113..985
/gene="SGCD"
/gene_synonym="35DAG"
/gene_synonym="CMD1L"
/gene_synonym="DAGD"
/gene_synonym="MGC22567"
/gene_synonym="SG-delta"
/gene_synonym="SGCDP"
/gene_synonym="SGD"
/codon_start=1
/product="sarcoglycan, delta (35kDa dystrophin-associated
glycoprotein)"
/protein_id="AAH20740.1"
/db_xref="GeneID:6444"
/db_xref="HGNC:HGNC:10807"
/db_xref="MIM:601411"
/translation="MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMI
LILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNAL
YFKSARNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVG
AERLRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNME
ATCRTELRLESKDGEIKLDAAKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQA
GAGSTCQINTSVCL"
BASE COUNT 372 a 250 c 305 g 293 t
ORIGIN
1 agagctgctc agcacgccct gggatcgcgg gcggttttca tcggccggtt tgtgaaacgg
61 acaagagaga gacattactg ccgggagtgt tgagtgaagg gaccaggtgg agatgatgcc
121 tcaggagcag tacactcacc accggagcac catgcctggc tctgtggggc cacaggtata
181 caaggtgggg atttacggct ggcggaaacg atgcctgtat ttctttgtcc tgctcctcat
241 gattttaata ctggtgaact tggccatgac catctggatt ctcaaagtca tgaacttcac
301 aattgatgga atgggaaacc tgaggatcac agaaaaaggt ctaaagctag aaggagactc
361 tgaattctta caacctctct acgccaaaga aatccagtcc cgaccaggta atgccctgta
421 cttcaagtct gccagaaatg ttacagtgaa cattctcaat gaccagacta aagtgctaac
481 tcagcttata acaggtccaa aagccgtaga agcttatggt aaaaaatttg aggtaaaaac
541 tgtttctgga aaattgctct tctctgcaga caataatgaa gtggtagtag gagctgaaag
601 attacgagtt ttaggagcgg agggcacagt gttccctaaa tctatagaaa cacctaatgt
661 cagggcagac cccttcaaag aactaaggtt ggagtcccca acccggtctc tagtgatgga
721 ggccccaaaa ggagtggaaa tcaatgcaga agctggcaat atggaagcca cctgcaggac
781 agagctgaga ctggaatcca aagatggaga gattaagtta gatgctgcga aaatcaggct
841 acctagactg cctcatggat cctacacgcc tacaggaacg aggcagaagg tcttcgagat
901 ctgcgtctgc gccaatggga gattattcct gtctcaggca ggagctgggt ccacttgtca
961 gataaacaca agtgtctgcc tctgaaagac tatccatagt ggacattgtt ggcagcataa
1021 aggccttttt tggctttaga cactggctgc cagctatttt tactagaaca cagaaagcct
1081 atcaaagacc ttgtgtgtat gtgtacgtgt gtgtgcgtgc ttgagtgtgt tcgcgtgtgt
1141 gggtggatat aaatatatat aaatatatat aaataaatat atatatcctc tgtatcaaaa
1201 aaaaaaaaaa aaaaaaaaaa
//