LOCUS BC020737 1386 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
K, mRNA (cDNA clone MGC:22559 IMAGE:4722399), complete cds.
ACCESSION BC020737
VERSION BC020737.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1386)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1386)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23199982.
FEATURES Location/Qualifiers
source 1..1386
/db_xref="H-InvDB:HIT000038926"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22559 IMAGE:4722399"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1386
/gene="PIGK"
/gene_synonym="GPI8"
/gene_synonym="MGC22559"
/db_xref="GeneID:10026"
/db_xref="HGNC:HGNC:8965"
/db_xref="MIM:605087"
CDS 25..1212
/gene="PIGK"
/gene_synonym="GPI8"
/gene_synonym="MGC22559"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class K"
/protein_id="AAH20737.1"
/db_xref="GeneID:10026"
/db_xref="HGNC:HGNC:8965"
/db_xref="MIM:605087"
/translation="MAVTDSLSRAATVLATVLLLSFGSVAASHIEDQAEQFFRSGHTN
NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATV
FSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILIY
MTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSP
NIMALASSQVGEDSLSHQPDPAIGVHLMDRYTFYVLEFLEEINPASQTNMNDLFQVCP
KSLCVSTPGHRTDLFQRDPKNVLITDFFGSVRKVEITTETIKLQQDSEIMESSYKEDQ
MDEKLMEPLKYAEQLPVAQIIHQKPKLKDWHPPGGFILGLWALIIMVFFKTYGIKHMK
FIF"
BASE COUNT 449 a 238 c 292 g 407 t
ORIGIN
1 gcgggaagtc tgaagccggt aaacatggcc gtcaccgaca gcctcagccg ggctgcgact
61 gtcttggcaa ctgtgttgct cttgtccttc ggcagcgtgg ccgctagtca tatcgaggat
121 caagcagaac aattctttag aagtggccat acaaacaact gggctgttct ggtgtgtaca
181 tcccgattct ggtttaatta tcgacatgtt gcaaataccc tttctgttta tagaagtgtc
241 aagaggctag gtattcctga cagtcacatt gtcctaatgc ttgcagatga tatggcctgt
301 aatcctagaa atcccaaacc agctacagtg tttagtcaca agaatatgga actaaatgtg
361 tatggagatg atgtggaagt ggattataga agttatgagg taactgtgga gaatttttta
421 cgggtattaa ctgggaggat cccacctagt actcctcggt caaaacgtct tctttctgat
481 gacagaagca atattctaat ttatatgaca gggcatggtg gaaatggttt cttaaaattt
541 caagattctg aagaaattac caacatagaa ctcgcggatg cttttgaaca aatgtggcag
601 aaaagacgct acaatgagct actgtttatt attgatactt gccaaggagc atccatgtat
661 gaacgatttt attctcctaa cataatggct ctagctagta gtcaagtggg agaagattca
721 ctctcgcatc aacctgatcc tgcaattgga gtccatctta tggatagata cacattttat
781 gtcttggaat ttttggaaga aattaaccca gctagccaaa ctaatatgaa tgaccttttt
841 caggtatgtc ccaaaagtct gtgtgtgtct actcctggac atcgcactga tctttttcag
901 agggatccta aaaatgtact gataactgat ttctttggaa gtgtacggaa agtggaaatt
961 acaacagaga ctattaaatt gcaacaggat tcagaaatca tggaaagcag ctataaggaa
1021 gaccagatgg atgagaaact aatggaacct ctgaaatatg ctgaacaact tcctgtagct
1081 cagataatac accagaaacc gaagctgaaa gactggcatc ctcctggggg ctttattctg
1141 ggattatggg cacttattat catggttttc ttcaaaactt atggaattaa gcatatgaag
1201 ttcatttttt agacttgatg atgaatgaag aatgcatgga ggactgcaaa cttggataat
1261 aatttatgtc attatatatt tttaaaaatg tgtttctctt gtatgaattg gaaataagta
1321 taaggaaact aaatttgaat caactattaa ttttataaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaa
//