LOCUS BC020732 1603 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens SH2 domain protein 1A, mRNA (cDNA clone MGC:22550
IMAGE:4702653), complete cds.
ACCESSION BC020732
VERSION BC020732.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1603)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1603)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506922.
FEATURES Location/Qualifiers
source 1..1603
/db_xref="H-InvDB:HIT000038923"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22550 IMAGE:4702653"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1603
/gene="SH2D1A"
/gene_synonym="DSHP"
/gene_synonym="EBVS"
/gene_synonym="MTCP1"
/gene_synonym="SAP"
/gene_synonym="XLP"
/gene_synonym="XLPD"
/db_xref="GeneID:4068"
/db_xref="HGNC:HGNC:10820"
/db_xref="MIM:300490"
CDS 94..480
/gene="SH2D1A"
/gene_synonym="DSHP"
/gene_synonym="EBVS"
/gene_synonym="MTCP1"
/gene_synonym="SAP"
/gene_synonym="XLP"
/gene_synonym="XLPD"
/codon_start=1
/product="SH2 domain protein 1A"
/protein_id="AAH20732.1"
/db_xref="GeneID:4068"
/db_xref="HGNC:HGNC:10820"
/db_xref="MIM:300490"
/translation="MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLC
VLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQYPV
EKKSSARSTQGTTGIREDPDVCLKAP"
BASE COUNT 510 a 288 c 323 g 482 t
ORIGIN
1 gagtcaggtg gttgacttgt gcctggctgc agtagcagcg gcatctccct tgcacagttc
61 tcctcctcgg cctgcccaag agtccaccag gccatggacg cagtggctgt gtatcatggc
121 aaaatcagca gggaaaccgg cgagaagctc ctgcttgcca ctgggctgga tggcagctat
181 ttgctgaggg acagcgagag cgtgccaggc gtgtactgcc tatgtgtgct gtatcacggt
241 tacatttata cataccgagt gtcccagaca gaaacaggtt cttggagtgc tgagacagca
301 cctggggtac ataaaagata tttccggaaa ataaaaaatc tcatttcagc atttcagaag
361 ccagatcaag gcattgtaat acctctgcag tatccagttg agaagaagtc ctcagctaga
421 agtacacaag gtactacagg gataagagaa gatcctgatg tctgcctgaa agccccatga
481 agaaaaataa aacaccttgt actttatttt ctataattta aatatatgct aagtcttata
541 tattgtagat aatacagttc ggtgagctac aaatgcattt ctaaagccat tgtagtcctg
601 taatggaagc atctagcatg tcgtcaaagc tgaaatggac ttttgtacat agtgaggagc
661 tttgaaacga ggattgggaa aaagtaattc cgtaggttat tttcagttat tatatttaca
721 aatgggaaac aaaaggataa tgaatacttt ataaaggatt aatgtcaatt cttgccaaat
781 ataaataaaa ataatcctca gtttttgtga aaagctccat ttttagtgaa atattatttt
841 atagctacta attttaaaat gtcttgcttg attgtatggt gggaagttgg ctggtgtccc
901 ttgtctttgc caagttctcc actagctatg gtgtcatagg ctcttttggg atttttgaag
961 ctgtatactg tgtgctaaaa caagcactaa acaaagagtg aaggatttat gtttaattct
1021 gaaagcaacc ttcttgccta gtgttctgat attggacagt aaaatccaca gaccaacctg
1081 gagttgaaaa tcttataatt taaaatatgc tctaaacatg tttatcgtat ttgatgctac
1141 aggatttgaa attgtattac aaatccaatg aaatgagttt ttcttttcat ttacctctgc
1201 cccagttgtt tctactacat ggaagacctc attttgaagg gaaatttcag cagctgcagc
1261 tcatgagtaa ctgatttgta acaagcctcc ttttaaagta accctacaaa accactggaa
1321 agtttatggt tgtattattt ttaaaaaaaa ttccaagtga ttgaaaccta cacgagatac
1381 agaattttat gcggcatttt cttctcacat ttatattttt gtgattttgt gattgattat
1441 atgtcacttt gctacagggc tcacagaatt cattcactca acaaacataa tagggcgctg
1501 agggcataga agtaaaaaca cctggtccct gctctcagtt cactgtcttg ttggacgaga
1561 aaacaataac gataaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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