LOCUS BC020713 1289 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin),
member 5, mRNA (cDNA clone MGC:22489 IMAGE:4248249), complete cds.
ACCESSION BC020713
VERSION BC020713.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1289)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1289)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851464.
FEATURES Location/Qualifiers
source 1..1289
/db_xref="H-InvDB:HIT000038912"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22489 IMAGE:4248249"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1289
/gene="SERPINB5"
/gene_synonym="maspin"
/db_xref="GeneID:5268"
/db_xref="MIM:154790"
CDS 96..791
/gene="SERPINB5"
/gene_synonym="maspin"
/codon_start=1
/product="SERPINB5 protein"
/protein_id="AAH20713.1"
/db_xref="GeneID:5268"
/db_xref="MIM:154790"
/translation="MDALQLANSAFAVDLFKQLCEKEPLGNVLFSPICLSTSLSLAQV
GAKGDTANEIGQVLHFENVKDVPFGFQTVTSDVNKLSSFYSLKLIKRLYVDKSLNLST
EFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFENILADNSVNDQTKIL
VVNAAYFVGKWMKKFPESETKECPFRVNKVCGAACSSKRSPIIDVKNDRDRVGHKSIP
MRNLRARPAKCLS"
BASE COUNT 401 a 274 c 280 g 334 t
ORIGIN
1 agacacggtc gcctccacat ccaggtcttt gtgctcctcg cttgcctgtt ccttttccac
61 gcattttcca ggataactgt gactccaggc ccgcaatgga tgccctgcaa ctagcaaatt
121 cggcttttgc cgttgatctg ttcaaacaac tatgtgaaaa ggagccactg ggcaatgtcc
181 tcttctctcc aatctgtctc tccacctctc tgtcacttgc tcaagtgggt gctaaaggtg
241 acactgcaaa tgaaattgga caggttcttc attttgaaaa tgtcaaagat gtaccctttg
301 gatttcaaac agtaacatcg gatgtaaaca aacttagttc cttttactca ctgaaactaa
361 tcaagcggct ctacgtagac aaatctctga atctttctac agagttcatc agctctacga
421 agagacccta tgcaaaggaa ttggaaactg ttgacttcaa agataaattg gaagaaacga
481 aaggtcagat caacaactca attaaggatc tcacagatgg ccactttgag aacattttag
541 ctgacaacag tgtgaacgac cagaccaaaa tccttgtggt taatgctgcc tactttgttg
601 gcaagtggat gaagaaattt cctgaatcag aaacaaaaga atgtcctttc agagtcaaca
661 aggtatgtgg ggcagcatgt agcagtaaaa ggagcccaat tatagatgtg aaaaatgaca
721 gggacagagt ggggcataaa tccattccaa tgaggaacct gagggcacgg ccggcaaagt
781 gcctttcctg agatgaacag ctggaaggta agtggtacaa aaagagccag aatccagagg
841 ccccccctcc tcttttccat aatgtcttca aggatctgag ctgagtgaaa ctttatagaa
901 tttgtaaccc agcgaggaaa gctaagtcac cggctgaaaa atagctacaa acatctgaga
961 actttagcag aaaaggaaaa gaccaaactc tgttatcaga ggactttgga ttatcatgaa
1021 accttgacat ctaggaatct tgttcctgat tgattaactt ctctaacatc tcatttcctt
1081 atcggttgat agcgaagtat attgttctgg gattttaatt tataatttat aagatgcttt
1141 gatggctggg cgtggtggct tatgcctgta gtcccatgac tttgggaagc cgaggagggc
1201 agatcacctg aggtcaggag ttggagaccg gcctggccaa catggtgaaa ccctgtctct
1261 accaaaaaaa aaaaaaaaaa aaaaaaaaa
//