LOCUS BC020703 1182 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens apolipoprotein H (beta-2-glycoprotein I), mRNA (cDNA
clone MGC:22465 IMAGE:4767966), complete cds.
ACCESSION BC020703
VERSION BC020703.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1182)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1182)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: l Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557326.
FEATURES Location/Qualifiers
source 1..1182
/db_xref="H-InvDB:HIT000038905"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22465 IMAGE:4767966"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1182
/gene="APOH"
/gene_synonym="BG"
/db_xref="GeneID:350"
/db_xref="HGNC:HGNC:616"
/db_xref="MIM:138700"
CDS 18..1055
/gene="APOH"
/gene_synonym="BG"
/codon_start=1
/product="apolipoprotein H (beta-2-glycoprotein I)"
/protein_id="AAH20703.1"
/db_xref="GeneID:350"
/db_xref="HGNC:HGNC:616"
/db_xref="MIM:138700"
/translation="MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYEPG
EEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTTFEY
PNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSA
GNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNY
PAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMPSCKASCKVPVKKATVVYQ
GERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFKEHSSLAF
WKTDASDVKPC"
BASE COUNT 375 a 250 c 242 g 315 t
ORIGIN
1 agtgtgactc atccacaatg atttctccag tgctcatctt gttctcgagt tttctctgcc
61 atgttgctat tgcaggacgg acctgtccca agccagatga tttaccattt tccacagtgg
121 tcccgttaaa aacattctat gagccaggag aagagattac gtattcctgc aagccgggct
181 atgtgtcccg aggagggatg agaaagttta tctgccctct cacaggactg tggcccatca
241 acactctgaa atgtacaccc agagtatgtc cttttgctgg aatcttagaa aatggagccg
301 tacgctatac gacttttgaa tatcccaaca cgatcagttt ttcttgtaac actgggtttt
361 atctgaatgg cgctgattct gccaagtgca ctgaggaagg aaaatggagc ccggagcttc
421 ctgtctgtgc tcccatcatc tgccctccac catccatacc tacgtttgca acacttcgtg
481 tttataagcc atcagctgga aacaattccc tctatcggga cacagcagtt tttgaatgtt
541 tgccacaaca tgcgatgttt ggaaatgata caattacctg cacgacacat ggaaattgga
601 ctaaattacc agaatgcagg gaagtaaaat gcccattccc atcaagacca gacaatggat
661 ttgtgaacta tcctgcaaaa ccaacacttt attacaagga taaagccaca tttggctgcc
721 atgatggata ttctctggat ggcccggaag aaatagaatg taccaaactg ggaaactggt
781 ctgccatgcc aagttgtaaa gcatcttgta aagtacctgt gaaaaaagcc actgtggtgt
841 accaaggaga gagagtaaag attcaggaaa aatttaagaa tggaatgcta catggtgata
901 aagtttcttt cttctgcaaa aataaggaaa agaagtgtag ctatacagag gatgctcagt
961 gtatagatgg cactatcgaa gtccccaaat gcttcaagga acacagttct ctggcttttt
1021 ggaaaactga tgcatccgat gtaaagccat gctaaggtgg ttttcagatt ccacataaaa
1081 tgtcacactt gtttcttgtt catccaagga acctaattga aatttaaaaa taaagctact
1141 gaatttattg ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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