LOCUS BC020698 860 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-C motif) ligand 20, mRNA (cDNA clone MGC:22449 IMAGE:4712025), complete cds. ACCESSION BC020698 VERSION BC020698.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 860) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 860) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: c Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759075. FEATURES Location/Qualifiers source 1..860 /db_xref="H-InvDB:HIT000038902" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22449 IMAGE:4712025" /tissue_type="Liver" /clone_lib="NIH_MGC_76" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..860 /gene="CCL20" /gene_synonym="CKb4" /gene_synonym="LARC" /gene_synonym="MIP-3a" /gene_synonym="MIP3A" /gene_synonym="ST38" /db_xref="GeneID:6364" /db_xref="HGNC:HGNC:10619" /db_xref="MIM:601960" CDS 71..358 /gene="CCL20" /gene_synonym="CKb4" /gene_synonym="LARC" /gene_synonym="MIP-3a" /gene_synonym="MIP3A" /gene_synonym="ST38" /codon_start=1 /product="chemokine (C-C motif) ligand 20" /protein_id="AAH20698.1" /db_xref="GeneID:6364" /db_xref="HGNC:HGNC:10619" /db_xref="MIM:601960" /translation="MCCTKSLLLAALMSVLLLHLCGESEASNFDCCLGYTDRILHPKF IVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM" BASE COUNT 291 a 139 c 157 g 273 t ORIGIN 1 agaatataac agcactccca aagaactggg tactcaacac tgagcagatc tgttctttga 61 gctaaaaacc atgtgctgta ccaagagttt gctcctggct gctttgatgt cagtgctgct 121 actccacctc tgcggcgaat cagaagcaag caactttgac tgctgtcttg gatacacaga 181 ccgtattctt catcctaaat ttattgtggg cttcacacgg cagctggcca atgaaggctg 241 tgacatcaat gctatcatct ttcacacaaa gaaaaagttg tctgtgtgcg caaatccaaa 301 acagacttgg gtgaaatata ttgtgcgtct cctcagtaaa aaagtcaaga acatgtaaaa 361 actgtggctt ttctggaatg gaattggaca tagcccaaga acagaaagaa ccttgctggg 421 gttggaggtt tcacttgcac atcatggagg gtttagtgct tatctaattt gtgcctcact 481 ggacttgtcc aattaatgaa gttgattcat attgcatcat agtttgcttt gtttaagcat 541 cacattaaag ttaaactgta ttttatgtta tttatagctg taggttttct gtgtttagct 601 atttaatact aattttccat aagctatttt ggtttagtgc aaagtataaa attatatttg 661 ggggggaata agattatatg gactttcttg caagcaacaa gctatttttt aaaaaaacta 721 tttaacattc ttttgtttat attgttttgt ctcctaaatt gttgtaattg cattataaaa 781 taagaaaaat attaataaga caaatattga aaataaagaa acaaaaagct aaaaaaaaaa 841 aaaaaaaaaa aaaaaaaaaa //