LOCUS BC020684 1999 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sushi-repeat-containing protein, X-linked, mRNA (cDNA
clone MGC:22406 IMAGE:4731946), complete cds.
ACCESSION BC020684
VERSION BC020684.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1999)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314639.
FEATURES Location/Qualifiers
source 1..1999
/db_xref="H-InvDB:HIT000038894"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22406 IMAGE:4731946"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1999
/gene="SRPX"
/gene_synonym="DRS"
/gene_synonym="ETX1"
/db_xref="GeneID:8406"
/db_xref="HGNC:HGNC:11309"
/db_xref="MIM:300187"
CDS 88..1482
/gene="SRPX"
/gene_synonym="DRS"
/gene_synonym="ETX1"
/codon_start=1
/product="sushi-repeat-containing protein, X-linked"
/protein_id="AAH20684.1"
/db_xref="GeneID:8406"
/db_xref="HGNC:HGNC:11309"
/db_xref="MIM:300187"
/translation="MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEV
GYSHPRYKDTPWCSPIKVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLI
CQSNKRWSDKVICKQKRCPTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVT
CMDNKAWSGRPASCVDMEPPRIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTD
VILKGLPPGSNFPEGDHKIQYTVYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCS
SDGDNYGATCEFSCIGGYELQGSPARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLD
QFYEKRRLLIVSTPTARNLLYRLQLGMLQQAQCGLDLRHITVVELVGVFPTLIGRIGA
KIMPPALALQLRLLLRIPLYSFSMVLVDKHGMDKERYVSLVMPVALFNLIDTFPLRKE
EMVLQAEMSQTCNT"
BASE COUNT 615 a 478 c 450 g 456 t
ORIGIN
1 gagcacgcag tcccttggtc tcttcggtct cctgccgccc ccgggaagcg cgctgcgctg
61 ccgaggcgag ctaagcgccc gctcgccatg gggagccccg cacatcggcc cgcgctgctg
121 ctgctgctgc cgcctctgct gctgctgctg ctgctgcgcg tcccgcccag ccgcagcttc
181 ccaggatcgg gagactcacc actagaagac gatgaagtcg ggtattcaca ccctagatat
241 aaagataccc cgtggtgctc ccccatcaag gtgaagtatg gggatgtgta ctgcagggcc
301 cctcaaggag gatactacaa aacagccctg ggaaccaggt gcgacattcg ctgccagaag
361 ggctacgagc tgcatggctc ttccctactg atctgccagt caaacaaacg atggtctgac
421 aaggtcatct gcaaacaaaa gcgatgtcct acccttgcca tgccagcaaa tggagggttt
481 aagtgtgtag atggtgccta ctttaactcc cggtgtgagt attattgttc accaggatac
541 acgttgaaag gggagcggac cgtcacatgt atggacaaca aggcctggag cggccggcca
601 gcctcctgtg tggatatgga acctcctaga atcaagtgcc caagtgtgaa ggaacgcatt
661 gcagaaccca acaaactgac agtccgggtg tcctgggaga cacccgaagg aagagacaca
721 gcagatggaa ttcttactga tgtcattcta aaaggcctcc ccccaggctc caactttcca
781 gaaggagacc acaagatcca gtacacagtc tatgacagag ctgagaataa gggcacttgc
841 aaatttcgag ttaaagtaag agtcaaacgc tgtggcaaac tcaatgcccc agagaatggt
901 tacatgaagt gctccagcga cggtgataat tatggagcca cctgtgagtt ctcctgcatc
961 ggcggctatg agctccaggg tagccctgcc cgagtatgtc aatccaacct ggcttggtct
1021 ggcacggagc ccacctgtgc agccatgaac gtcaatgtgg gtgtcagaac ggcagctgca
1081 cttctggatc agttttatga gaaaaggaga ctcctcattg tgtccacacc cacagcccga
1141 aacctccttt accggctcca gctaggaatg ctgcagcaag cacagtgtgg ccttgatctt
1201 cgacacatca ccgtggtgga gctggtgggt gtgttcccga ctctcattgg caggatagga
1261 gcaaagatta tgcctccagc cctagcgctg cagctcaggc tgttgctgcg aatcccactc
1321 tactccttca gtatggtgct agtggataag catggcatgg acaaagagcg ctatgtctcc
1381 ctggtgatgc ctgtggccct gttcaacctg attgacactt ttcccttgag aaaagaagag
1441 atggtcctac aagccgaaat gagccagacc tgtaacacct gacatgatgg ttcctctctt
1501 ggcaattcct cttcattgtc tacatagtga catgcacacg ggaaagcctt aaaaatatcc
1561 ttgatgtaca gattttattt gtaattttaa aagtctattt tattatgagc tttctttgca
1621 cttaaaaatt agcatgctgc tttttgtact tggaagtgtt tcaaaaaatt atatgaccat
1681 atttactctt tctaactttc tttactccat catggctggt tgattttgta gagaaattag
1741 aacccataac catacacagg ctatcaacat gttattcaat gtgacaccta actcttttct
1801 attttgtttt ttaagtaaga cttttattaa taaaacaaaa tgttttggag caaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaa
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