LOCUS BC020665 1689 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens betaine-homocysteine methyltransferase 2, mRNA (cDNA
clone MGC:22349 IMAGE:4722608), complete cds.
ACCESSION BC020665
VERSION BC020665.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1689)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1689)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: g Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20544175.
FEATURES Location/Qualifiers
source 1..1689
/db_xref="H-InvDB:HIT000038882"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22349 IMAGE:4722608"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1689
/gene="BHMT2"
/gene_synonym="FLJ20001"
/db_xref="GeneID:23743"
/db_xref="HGNC:HGNC:1048"
/db_xref="MIM:605932"
CDS 15..1106
/gene="BHMT2"
/gene_synonym="FLJ20001"
/codon_start=1
/product="betaine-homocysteine methyltransferase 2"
/protein_id="AAH20665.1"
/db_xref="GeneID:23743"
/db_xref="HGNC:HGNC:1048"
/db_xref="MIM:605932"
/translation="MAPAGRPGAKKGILERLESGEVVIGDGSFLITLEKRGYVKAGLW
TPEAVIEHPDAVRQLHMEFLRAGSNVMQTFTFSASEDNMESKWEDVNAAACDLAREVA
GKGDALVAGGICQTSIYKYQKDEARIKKLFRQQLEVFAWKNVDFLIAEYFEHVEEAVW
AVEVLKESDRPVAVTMCIGPEGDMHDITPGECAVRLVKAGASIVGVNCRFGPDTSLKT
MELMKEGLEWAGLKAHLMVQPLGFHAPDCGKEGFVDLPEYPFGLESRVATRWDIQKYA
REAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWI
RARARREYWENLLPASGRPFCPSLSKPDF"
BASE COUNT 494 a 356 c 458 g 381 t
ORIGIN
1 agagccgcgg caccatggca cctgctggac gcccgggggc caagaagggg attttggagc
61 gcctggagag tggggaggtt gtgattggag atggcagctt tctcattact ctggagaaga
121 gaggctatgt gaaggctggg ctctggactc cagaggcagt gatagaacac ccagacgcag
181 ttcgtcaact tcacatggaa ttcttgagag caggatcaaa tgtcatgcag acttttacct
241 tttctgccag tgaggacaat atggaaagca agtgggaaga tgtaaatgct gctgcctgtg
301 acctcgccag ggaagtggct ggcaaaggtg atgctttggt agcagggggg atctgccaga
361 catcaatata caaataccag aaggatgaag ctagaattaa aaaacttttt cgacaacagc
421 tagaagtttt tgcctggaaa aatgtggact tcttgattgc agagtatttt gagcacgttg
481 aagaagctgt gtgggctgtg gaagtcttaa aagaatcaga tagacccgtg gcagttacca
541 tgtgcatagg cccagaggga gacatgcatg atataacccc cggagaatgt gctgtgaggc
601 tggtgaaggc aggggcttcc atcgttggcg tgaactgccg ctttgggccc gacaccagct
661 tgaagacgat ggagctcatg aaggagggtc ttgagtgggc agggctgaaa gcgcacctca
721 tggtgcagcc tctggggttc cacgcgcctg actgtggcaa agaggggttt gtggatctcc
781 cagaatatcc ctttggactg gagtccagag ttgccaccag atgggatatt caaaaatacg
841 ccagagaggc ctacaacctg ggggtcaggt acattggcgg gtgctgtgga tttgagccct
901 accacatcag ggcaattgca gaggagctgg ccccagaaag gggctttttg ccaccagctt
961 cagaaaaaca cggcagctgg ggaagtggtt tggacatgca caccaaaccc tggattagag
1021 caagggctcg aagggagtat tgggagaatc tgctgccagc ttcaggcaga cctttctgtc
1081 cttcgctgtc aaagccagac ttctaaggag tagtgaaaga aaaccctgaa ataatcgaac
1141 aggaaaaagt tgccctcaag cctgacctgg aaccgttcct caccttcatc ctcaccatgc
1201 cctgctatct ccagctgctg agcagctgag gtgctgcagc cccttccctt ccagcccaca
1261 agtgtgtgca tattgagctc ctgctgtggt taagcactgc aacagactct accagagatg
1321 caaagagaag cgagagaggc accttgttct ccaagaactt actgtccaat catgctgtgg
1381 tgcattcctt tgaagatcat gaagaatagc caaacttgtc tttgagggtg aatttgacac
1441 tttaaaataa tcagaagtca ctgagaccca aagctagtga ataattcaag tgactaagct
1501 agatacttga ggatgataga gcaacactaa actaaagcaa tgagtctgct ttttttaatg
1561 atttatacaa tgactccaaa ggcaatccca aagaaaagat gtaaagaatg ttttgagcaa
1621 tggtagcatt attgaaataa atgtttaact atccaaagga aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaa
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