LOCUS BC020660 2313 bp mRNA linear HUM 06-OCT-2003 DEFINITION Homo sapiens spermatogenesis associated 6, mRNA (cDNA clone MGC:22335 IMAGE:4657425), complete cds. ACCESSION BC020660 VERSION BC020660.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2313) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2313) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 36 Row: i Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 9506602. FEATURES Location/Qualifiers source 1..2313 /db_xref="H-InvDB:HIT000038879" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22335 IMAGE:4657425" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_61" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..2313 /gene="SPATA6" /gene_synonym="FLJ10007" /gene_synonym="SRF-1" /gene_synonym="SRF1" /db_xref="GeneID:54558" CDS 3..1421 /gene="SPATA6" /gene_synonym="FLJ10007" /gene_synonym="SRF-1" /gene_synonym="SRF1" /codon_start=1 /product="SPATA6 protein" /protein_id="AAH20660.1" /db_xref="GeneID:54558" /translation="MPKVKALQCALALEISSVTCPGVVPKDIEDIYLSICVFGQYKKT QCVPATFPLVFNARMVFEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYD ENTRDFMFPGPNQMSGHHDSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCH TQDKFIYHLAPVEKSHGRLQNRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSP SPYTKRRMCELSEDTRRRLAHLNLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSG RDCERDGWSRVHNDHSHLGCCRPKDYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRH SARTLLVHSAPSTMPKHSPSPVLNRASLRERFHSDWCSPSNCDEIHDRDERDLEKDDE LELKRSLLCRDSAYDSDPEYSSCQQPRGTFHLDDGEYWSNRAASYKGKSHRPIFENSM DKMYRNLYKKACSSASHTQESF" BASE COUNT 738 a 470 c 446 g 659 t ORIGIN 1 ggatgccgaa ggtgaaggcg ctgcagtgcg ccctggcgct ggagatcagc tcagtaactt 61 gcccaggagt cgtgcctaaa gacatagagg acatctatct tagcatctgt gtgtttggcc 121 aatacaaaaa gacacaatgt gtcccagcca cttttcccct ggtcttcaat gccagaatgg 181 tgtttgaaaa ggtgttcccg gacgcagtag atcctggaga tgtggttaca cagcttgaat 241 atgatacagc agtgttcgag ttgatacagc tagttccacc agtgggtgaa acactgtcta 301 cgtatgacga aaatacacga gatttcatgt ttccgggtcc aaaccaaatg tctggacacc 361 atgattcaaa ccgccaggtt accatgagga ggatttctgg ccttcgagga aatgctccaa 421 ggctggaatt ttctacgact tcagtgatta ctgaatgtct gataagttca aggaaatgcc 481 acactcagga taaatttatt taccatttgg ctccagttga aaaatcacat ggcagactgc 541 aaaacagaac atcaagatca caaaagaaaa aatccaagtc acctgagaga agtaaatact 601 gtataaatgc aaaaaactac gaacagccta caatttcttc aaaatcacac tctccatctc 661 cctacacaaa aagacgcatg tgtgagctat ctgaagacac caggcggcgg ctggcccatt 721 taaatctggg accctatgag ttcaaaaaag aaacagataa acctccattt gtgattagac 781 atgttgatcc cccaagtccc agggctgata ctttattggg atcttctgga agagactgtg 841 aaagagatgg atggtcaagg gtgcacaatg atcattctca tcttggctgc tgccgaccca 901 aggattataa ggttatcagg acaccccatg ggagagactt cgatgactct ttagaaaaat 961 gtgaagagta tttgagccca aggtcgtgta gtaagccccg gcattcagcg aggaccttgc 1021 tagtccattc agcaccctca acaatgccaa agcattctcc aagccctgtg ttaaatagag 1081 cttctctcag ggaaagattt cattctgatt ggtgttcacc ttcaaactgc gatgagatcc 1141 atgaccggga tgagagagac ctagagaaag atgatgaact ggaactgaaa agaagtcttt 1201 tatgtagaga ctctgcctat gacagtgacc ccgagtatag ctcatgtcag cagccacgtg 1261 gcactttcca tttggatgac ggtgaatact ggtccaacag ggcagcctct tataagggaa 1321 aatcccaccg acccatcttt gagaacagca tggacaagat gtacaggaac ttatacaaaa 1381 aggcctgtag ttctgcttca catacacagg aaagcttctg agaccatcca tgataaacct 1441 cattagtgtc cgtgtcaatt tctcaatgaa aatgtttgat gtgatcaata tctgtattcc 1501 tttttttaaa aaaaatggga ttataactaa gtacaatagt tatacttgaa taagttcatt 1561 acttcaaatg gtaaattatc ataggcaagc cttttaaaat aattattaca gaagagtctg 1621 ctgtgttaca aacattagag ctctgtcaca caatcacaac ttccaatatg tgacaaggat 1681 attctgttac atgtacacct catattccat ctgcaaatcc aagaatagtt cctttctaga 1741 aatgtttttt ttgccttact caccttgcaa ttttcttctc atctacttaa ctggttatct 1801 tgcctgtgta agatttaatt aatattgact accttttctt ggtgatgaac aaaatgatat 1861 cctatacaga aatgaatttc ctaagggttt aaaccctgtt ttcactaaca ttttctactt 1921 tttccttttt cagaacaggc tattctattt cttagctcat aggctttctt tttaaagact 1981 atatgatcat tcactccttt ttctctggaa gaactgtgta agttgcttaa aatgcatagc 2041 agttagctag aaatatcagt gccatggatg atcaaaaatt tgaataacta atttttaaag 2101 ataaaattct ttgcatgatt ttttttctag ggccatacct tttggtgcaa ccagaatcag 2161 aaaatggcct ctgttagtaa gcttatagaa acctaaaaat aataatggaa ttatattgta 2221 atttgactgc ttggaatttg tgtaagtacc atatggccca aggcactatt atagtatcct 2281 cacaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //