LOCUS BC020660 2313 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens spermatogenesis associated 6, mRNA (cDNA clone
MGC:22335 IMAGE:4657425), complete cds.
ACCESSION BC020660
VERSION BC020660.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2313)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2313)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9506602.
FEATURES Location/Qualifiers
source 1..2313
/db_xref="H-InvDB:HIT000038879"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22335 IMAGE:4657425"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2313
/gene="SPATA6"
/gene_synonym="FLJ10007"
/gene_synonym="SRF-1"
/gene_synonym="SRF1"
/db_xref="GeneID:54558"
CDS 3..1421
/gene="SPATA6"
/gene_synonym="FLJ10007"
/gene_synonym="SRF-1"
/gene_synonym="SRF1"
/codon_start=1
/product="SPATA6 protein"
/protein_id="AAH20660.1"
/db_xref="GeneID:54558"
/translation="MPKVKALQCALALEISSVTCPGVVPKDIEDIYLSICVFGQYKKT
QCVPATFPLVFNARMVFEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYD
ENTRDFMFPGPNQMSGHHDSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCH
TQDKFIYHLAPVEKSHGRLQNRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSP
SPYTKRRMCELSEDTRRRLAHLNLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSG
RDCERDGWSRVHNDHSHLGCCRPKDYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRH
SARTLLVHSAPSTMPKHSPSPVLNRASLRERFHSDWCSPSNCDEIHDRDERDLEKDDE
LELKRSLLCRDSAYDSDPEYSSCQQPRGTFHLDDGEYWSNRAASYKGKSHRPIFENSM
DKMYRNLYKKACSSASHTQESF"
BASE COUNT 738 a 470 c 446 g 659 t
ORIGIN
1 ggatgccgaa ggtgaaggcg ctgcagtgcg ccctggcgct ggagatcagc tcagtaactt
61 gcccaggagt cgtgcctaaa gacatagagg acatctatct tagcatctgt gtgtttggcc
121 aatacaaaaa gacacaatgt gtcccagcca cttttcccct ggtcttcaat gccagaatgg
181 tgtttgaaaa ggtgttcccg gacgcagtag atcctggaga tgtggttaca cagcttgaat
241 atgatacagc agtgttcgag ttgatacagc tagttccacc agtgggtgaa acactgtcta
301 cgtatgacga aaatacacga gatttcatgt ttccgggtcc aaaccaaatg tctggacacc
361 atgattcaaa ccgccaggtt accatgagga ggatttctgg ccttcgagga aatgctccaa
421 ggctggaatt ttctacgact tcagtgatta ctgaatgtct gataagttca aggaaatgcc
481 acactcagga taaatttatt taccatttgg ctccagttga aaaatcacat ggcagactgc
541 aaaacagaac atcaagatca caaaagaaaa aatccaagtc acctgagaga agtaaatact
601 gtataaatgc aaaaaactac gaacagccta caatttcttc aaaatcacac tctccatctc
661 cctacacaaa aagacgcatg tgtgagctat ctgaagacac caggcggcgg ctggcccatt
721 taaatctggg accctatgag ttcaaaaaag aaacagataa acctccattt gtgattagac
781 atgttgatcc cccaagtccc agggctgata ctttattggg atcttctgga agagactgtg
841 aaagagatgg atggtcaagg gtgcacaatg atcattctca tcttggctgc tgccgaccca
901 aggattataa ggttatcagg acaccccatg ggagagactt cgatgactct ttagaaaaat
961 gtgaagagta tttgagccca aggtcgtgta gtaagccccg gcattcagcg aggaccttgc
1021 tagtccattc agcaccctca acaatgccaa agcattctcc aagccctgtg ttaaatagag
1081 cttctctcag ggaaagattt cattctgatt ggtgttcacc ttcaaactgc gatgagatcc
1141 atgaccggga tgagagagac ctagagaaag atgatgaact ggaactgaaa agaagtcttt
1201 tatgtagaga ctctgcctat gacagtgacc ccgagtatag ctcatgtcag cagccacgtg
1261 gcactttcca tttggatgac ggtgaatact ggtccaacag ggcagcctct tataagggaa
1321 aatcccaccg acccatcttt gagaacagca tggacaagat gtacaggaac ttatacaaaa
1381 aggcctgtag ttctgcttca catacacagg aaagcttctg agaccatcca tgataaacct
1441 cattagtgtc cgtgtcaatt tctcaatgaa aatgtttgat gtgatcaata tctgtattcc
1501 tttttttaaa aaaaatggga ttataactaa gtacaatagt tatacttgaa taagttcatt
1561 acttcaaatg gtaaattatc ataggcaagc cttttaaaat aattattaca gaagagtctg
1621 ctgtgttaca aacattagag ctctgtcaca caatcacaac ttccaatatg tgacaaggat
1681 attctgttac atgtacacct catattccat ctgcaaatcc aagaatagtt cctttctaga
1741 aatgtttttt ttgccttact caccttgcaa ttttcttctc atctacttaa ctggttatct
1801 tgcctgtgta agatttaatt aatattgact accttttctt ggtgatgaac aaaatgatat
1861 cctatacaga aatgaatttc ctaagggttt aaaccctgtt ttcactaaca ttttctactt
1921 tttccttttt cagaacaggc tattctattt cttagctcat aggctttctt tttaaagact
1981 atatgatcat tcactccttt ttctctggaa gaactgtgta agttgcttaa aatgcatagc
2041 agttagctag aaatatcagt gccatggatg atcaaaaatt tgaataacta atttttaaag
2101 ataaaattct ttgcatgatt ttttttctag ggccatacct tttggtgcaa ccagaatcag
2161 aaaatggcct ctgttagtaa gcttatagaa acctaaaaat aataatggaa ttatattgta
2221 atttgactgc ttggaatttg tgtaagtacc atatggccca aggcactatt atagtatcct
2281 cacaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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