LOCUS BC020641 1368 bp mRNA linear HUM 01-FEB-2007
DEFINITION Homo sapiens ribosomal RNA processing 15 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:22291 IMAGE:4772128), complete cds.
ACCESSION BC020641
VERSION BC020641.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1368)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1368)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542299.
FEATURES Location/Qualifiers
source 1..1368
/db_xref="H-InvDB:HIT000038866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22291 IMAGE:4772128"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1368
/gene="RRP15"
/gene_synonym="CGI-115"
/db_xref="GeneID:51018"
/db_xref="HGNC:HGNC:24255"
CDS 77..856
/gene="RRP15"
/gene_synonym="CGI-115"
/codon_start=1
/product="ribosomal RNA processing 15 homolog (S.
cerevisiae)"
/protein_id="AAH20641.1"
/db_xref="GeneID:51018"
/db_xref="HGNC:HGNC:24255"
/translation="MKMVTGAVASVLEDEATDTSDSEGSCGSEKDHFYSDDDAIEADS
EGDAEPCDKENENDGESSVGTNMGWADAMAKVLNKKTPESKPTILVKNKKLEKEKEKL
KQERLEKIKQRDKRLEWEMMCRVKPDVVQDKETERNLQRIATRGVVQLFNAVQKHQKN
VDEKVKEAGSSMRKRAKLISTVSKKDFISVLRGMDGSTNETASSRKKPKAKQTEVKSE
EGPGWTILRDDFMMGASMKDWDKESDGPDDSRPESASDSDT"
BASE COUNT 499 a 200 c 310 g 359 t
ORIGIN
1 cagaaaaatg gcagccgccg ctccggactc acgtgtgagt gaggaagaaa acctgaaaaa
61 gaccccaaag aagaagatga aaatggtaac tggagccgta gcgtcggtgc tggaagacga
121 ggccacagac acttctgata gtgaaggaag ctgtggatcg gaaaaggacc acttttattc
181 tgatgatgac gcaatagaag ctgacagtga gggtgatgct gagccctgtg acaaagaaaa
241 tgaaaatgat ggagaatcaa gtgttgggac taatatgggc tgggcagatg ctatggctaa
301 agtcctcaac aagaaaactc ctgaaagtaa acctactatt ctggtcaaaa ataagaagct
361 ggaaaaggaa aaagaaaagt taaagcaaga aagactagag aaaataaaac agcgtgataa
421 gaggctggag tgggaaatga tgtgcagagt aaagccagat gttgtccaag acaaagagac
481 agagagaaat cttcagagaa ttgcaacaag gggtgtggtg caattattta atgctgttca
541 gaaacatcaa aagaatgttg atgaaaaggt taaggaagct ggaagttcta tgagaaagcg
601 tgctaagttg atatcaactg tttccaagaa agatttcatc agtgttttga gagggatgga
661 tggaagtaca aatgagactg cttcaagcag gaagaaacca aaagccaaac agactgaagt
721 gaaatcagaa gaaggcccag gttggacgat cctacgtgat gatttcatga tgggagcatc
781 tatgaaagac tgggacaagg aaagtgatgg gccagatgac agcagaccag aatctgcaag
841 tgactctgat acataaagca tcataggaaa tacaattgca gtcgttttat tttttctaga
901 aaaatatgtc atcctctgat agttggggaa ttataaggat accatttgta agaaagccaa
961 aagacttttg ccagatttca tatttcccct tttcatgtac actttatata tacttcatta
1021 aaattatatt ttaaaccctt gtataatttt aagcattgtt cctcagaaca tttgtaaaag
1081 gatatatttc tgcttgacca gcgagatgtg cattttgcca ggatcatatt ggtcatgtct
1141 attggtgtat tatttcagta tcaccaatgt tttcagaaat acagtactaa ttcatcatta
1201 aactctttga agttaatatt tttctgcctt ctaacttata gactcaacta tgtatctgta
1261 gtttttggga atggttggtg ttttttgctt tgtgttggga agttattgag aaaacctata
1321 taataaaatt taaaattata aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//