LOCUS BC020635 1244 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ficolin (collagen/fibrinogen domain containing) 1, mRNA (cDNA clone MGC:22273 IMAGE:4717731), complete cds. ACCESSION BC020635 VERSION BC020635.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1244) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1244) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: e Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8051583. FEATURES Location/Qualifiers source 1..1244 /db_xref="H-InvDB:HIT000038864" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22273 IMAGE:4717731" /tissue_type="Lung" /clone_lib="NIH_MGC_77" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1244 /gene="FCN1" /gene_synonym="FCNM" /db_xref="GeneID:2219" /db_xref="HGNC:HGNC:3623" /db_xref="MIM:601252" CDS 21..1001 /gene="FCN1" /gene_synonym="FCNM" /codon_start=1 /product="ficolin (collagen/fibrinogen domain containing) 1" /protein_id="AAH20635.1" /db_xref="GeneID:2219" /db_xref="HGNC:HGNC:3623" /db_xref="MIM:601252" /translation="MELSGATMARGLAVLLVLFLHIKNLPAQAADTCPEVKVVGLEGS DKLTILRGCPGLPGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEK GDAGQSQSCATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQR RMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFA KYKSFKVADEAEKYKLVLGAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQG AWWYADCHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKVRPA" BASE COUNT 311 a 334 c 380 g 219 t ORIGIN 1 agagtcaaag gccagagagc atggagctga gtggagccac catggcccgg ggtctcgctg 61 tcctgctagt cttgttcctg catatcaaga acctgcctgc ccaggctgcg gacacatgtc 121 cagaggtgaa ggtggtgggc ctggagggct ctgacaagct caccattctc cgaggctgcc 181 cggggctgcc cggggcccca gggccaaagg gagaggcagg tgtcattgga gagagaggag 241 aacgcggtct ccctggagcc cctggaaagg caggaccagt ggggcccaaa ggagaccgag 301 gagagaaggg gatgcgtgga gagaaaggag acgctgggca gtctcagtcg tgtgcgacag 361 gcccacgcaa ctgcaaggac ctgctagacc gggggtattt cctgagcggc tggcacacca 421 tctacctgcc cgactgccgg cccctgactg tgctctgtga catggacacg gacggagggg 481 gctggaccgt tttccagcgg aggatggatg gctctgtgga cttctatcgg gactgggccg 541 catacaagca gggcttcggc agtcagctgg gggagttctg gctggggaac gacaacatcc 601 acgccctgac tgcccaggga agcagcgagc tccgtgtaga cctggtggac tttgagggca 661 accaccagtt tgctaagtac aaatcattca aggtggctga cgaggcagag aagtacaagc 721 tggtactggg agcctttgtc gggggcagtg cgggtaattc tctaacgggc cacaacaaca 781 acttcttctc caccaaagac caagacaatg atgtgagttc ttcgaattgt gctgagaagt 841 tccagggagc ctggtggtac gccgactgtc atgcttcaaa cctcaatggt ctctacctca 901 tgggacccca tgagagctat gccaatggta tcaactggag tgcggcgaag gggtacaaat 961 atagctacaa ggtgtcagag atgaaggtgc ggcccgccta gacgggccag gacccctcca 1021 catgcacctg ctagtgggga ggccacaccc acaagcgctg cgtcgtggaa gtcaccccat 1081 ttccccagcc agacacactc ccatgacgcc cacagctgcc cctttgcccc cagctcagtc 1141 aagccgccac atgcccacaa cctcaccaga gggagaatta tgtttctaaa tatgtttact 1201 ttgggacaga aaagaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //