LOCUS BC020584 4192 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 172, member A, mRNA
(cDNA clone MGC:21999 IMAGE:4398813), complete cds.
ACCESSION BC020584
VERSION BC020584.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4192)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4192)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC020584.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059749.
FEATURES Location/Qualifiers
source 1..4192
/db_xref="H-InvDB:HIT000038836"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21999 IMAGE:4398813"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4192
/gene="FAM172A"
/gene_synonym="DKFZP564D172"
/db_xref="GeneID:83989"
/db_xref="HGNC:HGNC:25365"
CDS 10..1260
/gene="FAM172A"
/gene_synonym="DKFZP564D172"
/codon_start=1
/product="family with sequence similarity 172, member A"
/protein_id="AAH20584.1"
/db_xref="GeneID:83989"
/db_xref="HGNC:HGNC:25365"
/translation="MSISLSSLILLPIWINMAQIQQGGPDEKEKTTALKDLLSRIDLD
ELMKKDEPPLDFPDTLEGFEYAFNEKGQLRHIKTGEPFVFNYREDLHRWNQKRYEALG
EIITKYVYELLEKDCNLKKVSIPVDATESEPKSFIFMSEDALTNPQKLMVLIHGSGVV
RAGQWARRLIINEDLDSGTQIPFIKRAVAEGYGVIVLNPNENYIEVEKPKIHVQSSSD
SSDEPAEKRERKDKVSKETKKRRDFYEKYRNPQREKEMMQLYIRENGSPEEHAIYVWD
HFIAQAAAENVFFVAHSYGGLAFVELMIQREADVKNKVTAVALTDSVHNVWHQEAGKT
IREWMRENCCNWVSSSEPLDTSVESMLPDCPRVSAGTDRHELTSWKSFPSIFKFFTEA
SEAKTSSLKPAVTRRSHRIKHEEL"
BASE COUNT 1268 a 789 c 845 g 1290 t
ORIGIN
1 tgaagattga tgtctatttc cttgagctct ttaattttgt tgccaatttg gataaacatg
61 gcacaaatcc agcagggagg tccagatgaa aaagaaaaga ctaccgcact gaaagattta
121 ttatctagga tagatttgga tgaactaatg aaaaaagatg aaccgcctct tgattttcct
181 gataccctgg aaggatttga atatgctttt aatgaaaagg gacagttaag acacataaaa
241 actggggaac catttgtttt taactaccgg gaagatttac acagatggaa ccagaaaaga
301 tacgaggctc taggagagat catcacgaag tatgtatatg agctcctgga aaaggattgt
361 aatttgaaaa aagtatctat tccagtagat gccactgaga gtgaaccaaa gagttttatc
421 tttatgagtg aggatgcttt gacaaatcca cagaaactga tggttttaat tcatggtagt
481 ggtgttgtca gggcagggca gtgggctaga agacttatta taaatgaaga tctggacagt
541 ggcacacaga taccgtttat taaaagagct gtggctgaag gatatggagt aatagtacta
601 aatcccaatg aaaactatat tgaagtagaa aagccgaaga tacacgtaca gtcatcatct
661 gatagttcag atgaaccagc agaaaaacgg gaaagaaaag ataaagtttc taaagaaaca
721 aagaagcgac gtgatttcta tgagaagtat cgtaaccccc aaagagaaaa agaaatgatg
781 caattgtata tcagagaaaa tggttctcct gaagaacatg caatctatgt ttgggatcat
841 ttcatagctc aggctgctgc tgagaatgtg tttttcgttg ctcacagcta tggaggactt
901 gcttttgttg aactgatgat tcaacgagaa gccgatgtaa aaaataaggt aactgctgtg
961 gcattgacag actctgttca caatgtgtgg catcaagaag ctggcaaaac gattcgagaa
1021 tggatgagag agaactgttg taattgggtc tctagctcag aaccattaga cacatcagtg
1081 gagtccatgc tacctgattg cccccgggtc tcagcaggca ccgaccgtca cgagctaact
1141 tcctggaaga gctttccgtc tattttcaaa ttctttaccg aagcctcaga ggccaagacc
1201 agctccctga agccggctgt gacgcgccgc tcccaccgca tcaagcacga agagctgtaa
1261 gaggagcgag cgcgacgggg gaggccgccc tggcgcaccc acccgcacgc ctcctcactg
1321 cttgtgtcga gcggactccc agcccctcat tagattgttt tcttcccaga gcccagggtc
1381 gtgatatata catctaaata gcgttttgca ttatttctag atgagtgcaa ctgtcaaagc
1441 aatatgggtt cactggtcgt gcttcctgcg ggctgagcgc gggctgagcg ctgccagtca
1501 gcgctcacat taaggctgac agcgccctgc ctggctcggc cggcgaagct ctaattgccc
1561 tgaaggagac cgcgcgggcg ctgcgggtcc ggcggcgtcg gcgcggtcct agcgcccgcc
1621 gtagcggagc cgctgctgct tccccctcct taatcatgtc catctttccc cgctctcaac
1681 tggagcaaac ttctattcca gacttcagat ttccattttc actaggtttt tccctgaggg
1741 catcttatta cccacctctt tttttttttt ttttaaggaa gttccacaca cactccaaag
1801 ccgatttcaa attcagaacc tgaatgccat gatgtaccat gtagtttggg gaatgcaaat
1861 tgttctctcc ctgttttcat ttcgggacca gaaaaaaaaa caactctgca taaaaatcta
1921 taaagtactg aatccgcatt actgctgaaa atccttttgc cagctaattg tgagagttta
1981 cacaagtctc tgatttcaga agagactgtt aaaaccaaaa caatgatggg cagctctttt
2041 aagtgtaggt gtgaaggtcc cattttcaat ggaatttcca actgttatca ctgggattga
2101 ctttactttt taaacacata atgtgtactg tgtggcattg taatttagat ataacacact
2161 taagttttgc tttttaaatc tctctgtgga gaaaggttgt tgttaatcct ttccagaatg
2221 atctattctg agctttcctg gagttaggcc cttctaggga gagaattttt ttattgtcat
2281 caggaaacga aacctttgtg ctctgcagcc tttttcttct gaaaggctaa gtggggctaa
2341 aattatcctt ttagttttct gctttaacaa gaagagaagg acttggtgtg aaagaatttc
2401 ttctctcagt ccaatggtat aatttttagc actccgcttc ctctgtaggg tttagcccta
2461 cagtttgaac aattatttta atccagctaa gatgtggcca acactgtgaa atacaggaga
2521 tgttaaggtt ttgctgactt ttacattaaa atcttaaaat ttcacattat attttaatta
2581 cttgaaaagt ttaattacct agtaaagatt gtttctaata gatgagaaca taaatttaat
2641 agttttcatc cttttttaaa gtgtgtgcaa caattaatat gcctgcctta tttgaggaca
2701 tgataaaatg tacccaaaat gacttcgaac tgtctaatgc ctcagaaaag taacttaaaa
2761 tcaaccactt cgtgcttaaa tgtttttata ttatgaaccg atttcaacaa gttttaaagc
2821 tgttaatatc tcattgctgt gtttgacata caagtacatt cattggttct atagtcttaa
2881 tgatgacaaa ttaaagatgt tttttcagtg ctcaggtatg catatatttt cgtgttactt
2941 aagcaaaatc aactatatag gaggaaaaat caaaatggca ttttattcag ctaccagatg
3001 gcttaaaatg agtaaacccc aacaacatca agcacatttg tctgtgatat tgaccctttt
3061 tatccaatca ttactatttt agaagtagtg gtgaactgtg taaaataatg gtatcttcag
3121 cagtgttccg gaatcttagt tgagggacaa acattccttc cagtgagaga ttcaagaatt
3181 gatgtgaatt gaatatattt ttcaaggtat tataaattgt gttgtgtttt cagtataaga
3241 aaatgttgac aggaaacaat tttatagcat ttataaaaaa ccaacacttg tgcaatgcta
3301 aattggcgaa gcttctgcac ctgaattaga gcacaataaa tatgctgttt ataaaccaaa
3361 tcactgctat tccttctctg aaatcatctc tcctcttttt aaacctttac ttatagctag
3421 aataaatcac tatttaattg cctctaatac tttaaaacta ctggatggtt aggcctggtt
3481 taactattta tggagagcta tttgcaaact taagttgtgt aaatgtaatt tctacttgtg
3541 aatctgagct gtagcagccc agagggagct aggcaaacta ttccagacca ccaactgata
3601 agtgatcaga ttctttgtaa tgtaggattt tttaacctgt tgattatggg tttgttgata
3661 taaatgtaat aatgttcacc tcgattttcc tggagtaaca accagcgttg gtagtagccc
3721 acctgcatga ggacggccag tgttaacaat atttttgttc tgatcttctt ccccattttt
3781 gtttcctcaa acaggttttt aggagagtgg agatttaaag tcaggatgtg gcctttttat
3841 tttaattata tacttaattc ttagaacaag tagaatggga aaggagtgac tgataaatct
3901 aagattcaaa atagtcccgt cgaaacttaa aggccagatt attgctttgg agctttctat
3961 aggtactagc catcccgtcg ttaaatgttt tcatggatat ttgaaaagaa gaccatgtac
4021 ctttaataac tgttcttttc tcgagtttct gcctcgtgct ttgacctgga ttgcattatt
4081 attgtttatg cgaagtaaaa aaaaaaaagg aaagcacaag cttttcctgt atattatatt
4141 tccatttcca ttttaaaata aaaacaattt tcccaacaaa aaaaaaaaaa aa
//