LOCUS BC020577 2473 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens carbonic anhydrase X, mRNA (cDNA clone MGC:21795
IMAGE:4181377), complete cds.
ACCESSION BC020577
VERSION BC020577.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2473)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2473)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: d Column: 7.
FEATURES Location/Qualifiers
source 1..2473
/db_xref="H-InvDB:HIT000038834"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21795 IMAGE:4181377"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2473
/gene="CA10"
/gene_synonym="CA-RPX"
/gene_synonym="CARPX"
/gene_synonym="HUCEP-15"
/db_xref="GeneID:56934"
/db_xref="MIM:604642"
CDS 645..1631
/gene="CA10"
/gene_synonym="CA-RPX"
/gene_synonym="CARPX"
/gene_synonym="HUCEP-15"
/codon_start=1
/product="CA10 protein"
/protein_id="AAH20577.1"
/db_xref="GeneID:56934"
/db_xref="MIM:604642"
/translation="MEIVWEVLFLLQANFIVCISAQQNSPKIHEGWWAYKEVVQGSFV
PVPSFWGLVNSAWNLCSVGKRQSPVNIETSHMIFDPFLTPLRINTGGRKVSGTMYNTG
RHVSLRLDKEHLVNISGGPMTYSHRLEEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIH
YNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSNPFLNRMLNRDTITRITYKNDAYLLQ
GLNIEELYPETSSFITYDGSMTIPPCYETASWIIMNKPVYITRMQMHSLRLLSQNQPS
QIFLSMSDNFRPVQPLNNRCIRTNINFSLQGKDCPNNRAQKLQYRVNEWLLK"
misc_feature 783..1544
/gene="CA10"
/gene_synonym="CA-RPX"
/gene_synonym="CARPX"
/gene_synonym="HUCEP-15"
/note="carb_anhydrase; Region: Eukaryotic-type carbonic
anhydrase"
/db_xref="CDD:pfam00194"
BASE COUNT 692 a 602 c 585 g 594 t
ORIGIN
1 cagggacttg caggcaagag ttgcacctgg tctaggaacc tgcagagaaa agaactctgg
61 ggagaagaac tgccccggag cgcagcagcc accctccgac catgccccgg tgaggggggc
121 ggacttcgag ggcaacttgc cgcggactgc ctgggcttag ccagcgagct acgcgctccc
181 gggagcccgg aattgcacgg cgcagcccgg cggggggcta tcgtctatgt cttcttgggg
241 cgccagacga atcggggtct cgtttttgct ggaagagccc agtgttggtg gcttcaggtg
301 gctgctgccg ccgccgccgc cgccgccgct gctagtgcgg tttccgccgc tggtgcgaag
361 agaagagaca cgcgagcggg gagacctcca aggcagcgag gcatcggaca tgtgtcagca
421 catctggggc gcacatccgt cgagcccgag gggagatttg ccggaacaat tcaaactgcg
481 atattgatct tgggggtgac tgtccctggc cggctgtcgg gtgggagtgc gagtgtgcac
541 tcgctcggaa gtgtgtgcga gtgtgtatgt gtgtgtgccg tgtcgggctc cccccttccc
601 cccgttttcc cgtcgagtga tgcacttgga atgagaatca gaggatggaa atagtctggg
661 aggtgctttt tcttcttcaa gccaatttca tcgtctgcat atcagctcaa cagaattcac
721 caaaaatcca tgaaggctgg tgggcataca aggaggtggt ccagggaagc tttgttccag
781 ttccttcttt ctggggattg gtgaactcag cttggaatct ttgctctgtg gggaaacggc
841 agtcgccagt caacatagag accagtcaca tgatcttcga cccctttctg acacctcttc
901 gcatcaacac ggggggcagg aaggtcagtg ggaccatgta caacactgga agacacgtat
961 cccttcgcct ggacaaggag cacttggtca acatatctgg agggcccatg acatacagcc
1021 accggctgga ggagatccga ctacactttg ggagtgagga cagccaaggg tcggagcacc
1081 tcctcaatgg acaggccttc tctggggagg tgcagctcat ccactataac catgagctat
1141 atacgaatgt cacagaagct gcaaagagtc caaatggatt ggtggtagtt tctatattta
1201 taaaagtttc tgattcatca aacccatttc ttaatcgaat gctcaacaga gatactatca
1261 caagaataac atataaaaat gatgcatatt tactacaggg gcttaatata gaggaactat
1321 atccagagac ctctagtttc atcacttacg atgggtcgat gactatccca ccctgctatg
1381 agacagcaag ttggatcata atgaacaaac ctgtctatat aaccaggatg cagatgcatt
1441 ccttgcgcct gctcagccag aaccagccat ctcagatctt tctgagcatg agtgacaact
1501 tcaggcctgt ccagccactc aacaaccgct gcatccgcac caatatcaac ttcagtttac
1561 aggggaagga ctgtccaaac aaccgagccc agaagcttca gtatagagta aatgaatggc
1621 tcctcaagta gggaacaaag ccaagaagaa tcccacctca gtgaaatgct acaactgtga
1681 attgacgtaa cctagaatgt cccccttctt gcttctctct ccttctttcc cccaagcctc
1741 attcattctt gggattggcc ctttcttcat gaaaagtgtc tgcaaaacca tggcagagga
1801 atacatctct cacacatact cacaaacaca cacacaagca cttgcacata catacaaaca
1861 catgcaaaca tacctacaca cacacactct cttacaacct ccatcatggg aagtcaagtt
1921 tcagaaacaa aagtctcatt cataagaggt cttagaagaa aataaccagt taacctgatt
1981 tcaattttga taccgttttc ctgaactaat aaatctaccc aatgagactt ttcagccttt
2041 gtacatacaa aattcttcca aaagagagag gagaaaatac agctctgatg gcatcaaacg
2101 gactttgcat caagtaattt cagatagtgt cctaggatcc tttgagggtg ctggtagcag
2161 gtgagcagga caaagttgac caaggacact tatttctaga ttatgattct tctgtttact
2221 caacaattta caaagaaaaa aaggacagac attgaagagc tacacattgt atatatatca
2281 ccacagacta taaggaaatg gaattatttc cctctttgtc acatatctgt agtaggattt
2341 gccaagatca gaaatgatcc atttgctgtt tcttgttttc caaaggtcat acattgtgtt
2401 tggttattgt taccagctca ataaatgtgt ttaacgagtt aatttcaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaa
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