LOCUS BC020572 1834 bp mRNA linear HUM 12-FEB-2004
DEFINITION Homo sapiens F-box and leucine-rich repeat protein 13, mRNA (cDNA
clone IMAGE:4412932), partial cds.
ACCESSION BC020572
VERSION BC020572.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1834)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1834)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC020572.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: h Column: 21.
FEATURES Location/Qualifiers
source 1..1834
/db_xref="H-InvDB:HIT000038833"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4412932"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1834
/gene="FBXL13"
/gene_synonym="MGC21636"
/db_xref="GeneID:222235"
CDS <1..1712
/gene="FBXL13"
/gene_synonym="MGC21636"
/codon_start=3
/product="FBXL13 protein"
/protein_id="AAH20572.2"
/db_xref="GeneID:222235"
/translation="FFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFSSVKNVIPDK
YIVSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISE
GCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKL
IYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFT
GAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDS
SLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKL
SERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKE
LSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGC
PKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNISKK
AAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGALELTVKKSTYSSED
QAA"
misc_feature 330..1043
/gene="FBXL13"
/gene_synonym="MGC21636"
/note="LRR_RI; Region: Leucine-rich repeats (LRRs),
ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29
residue sequence motifs present in many proteins that
participate in protein-protein interactions and have
different functions and cellular locations. LRRs
correspond to structural units consisting of a beta strand
(LxxLxLxxN/CxL conserved pattern) and an alpha helix. This
alignment contains 12 strands corresponding to 11 full
repeats, consistent with the extent observed in the
subfamily acting as Ran GTPase Activating Proteins
(RanGAP1)"
/db_xref="CDD:cd00116"
BASE COUNT 564 a 382 c 364 g 524 t
ORIGIN
1 ttttcttcta cctcagttta aaagatgtga taatatgtgg tcaagttaat catgcctgga
61 tgttgatgac acaactaaac tcactgtgga atgctattga tttttcctca gtgaaaaatg
121 tgattccaga taaatatata gtgtctactt tgcaaaggtg gcgtttaaat gtgctgcgtt
181 tgaattttcg tggttgtctt ctccgaccca aaactttcag atctgtcagc cactgtagga
241 acttgcaaga gttgaatgtc tctgactgcc caacattcac agatgaatca atgagacaca
301 tttctgaggg ctgcccgggg gtcctgtgtc tcaatctgtc taacacaact atcaccaaca
361 ggacgatgcg actcctgccg aggcacttcc acaacttaca gaatcttagt ttggcttatt
421 gcagacggtt cacagacaaa ggcttacagt acctgaactt ggggaatgga tgccacaagc
481 tcatctatct ggacctctct ggctgcaccc agatttcagt ccaaggcttc aggtacattg
541 caaacagctg cactggaatt atgcatctta ccattaatga catgccaact ctgacggaca
601 actgtgtaaa agctttagtt gaaaaatgct ctcgtattac atcgctggtt ttcactggtg
661 caccgcatat ctccgattgt actttcagag ctctttctgc ttgtaaactc agaaagatcc
721 gatttgaagg aaataaaagg gttactgatg catccttcaa atttatagac aagaattatc
781 caaatctcag tcacatttat atggctgact gcaagggaat aacagacagc agcctcagat
841 ccctttcacc tttgaagcaa ctgactgtgt tgaatttggc aaattgtgta agaattggtg
901 atatgggact aaagcaattt cttgatggtc ctgcaagcat gaggataaga gagctaaatt
961 taagcaactg tgtgcggcta agtgatgcct ctgttatgaa actatctgag cgctgcccta
1021 atttaaacta cttgagttta cgaaattgtg aacatttgac tgcccaagga attggatata
1081 ttgtaaacat cttttccttg gtatcaatag atctctctgg aacagacatc tctaatgagg
1141 gtttgaatgt gctttccaga cataaaaaat tgaaggaact ttctgtatct gaatgttata
1201 gaatcactga tgatggaatt caggcattct gcaaaagctc actgatcttg gaacatttgg
1261 atgtctctta ttgctcccag ctgtcagata tgattatcaa agcactggcc atttactgca
1321 ttaacctcac atctctcagc attgctggct gtccaaagat tactgactca gcaatggaga
1381 tgttatcggc aaaatgccat tacctgcaca ttttggatat ctctggttgt gtcttgctta
1441 ctgaccaaat ccttgaggac cttcagatag gctgcaaaca actccggatc cttaagatgc
1501 aatactgcac aaatatttcc aagaaggcag ctcaaagaat gtcatctaaa gttcagcagc
1561 aggaatacaa cactaatgac cctccacgtt ggtttggcta tgatagggaa ggaaaccctg
1621 ttacagagct tgacaacata acatcatcta aaggagcctt agaattaaca gtgaaaaagt
1681 caacatacag cagtgaagac caagcagcgt gaccttcagc ctcaagcagg aagaacaaaa
1741 aatcaagaac ttggcaagtt ttctccattt gttgcaagta tgtttactag ctgaatctca
1801 ataacaatgt aaacaagcaa aaaaaaaaaa aaaa
//