LOCUS BC020569 3540 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens exportin, tRNA (nuclear export receptor for tRNAs),
mRNA (cDNA clone MGC:21567 IMAGE:4420052), complete cds.
ACCESSION BC020569
VERSION BC020569.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3540)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217845.
FEATURES Location/Qualifiers
source 1..3540
/db_xref="H-InvDB:HIT000038830"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21567 IMAGE:4420052"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3540
/gene="XPOT"
/gene_synonym="XPO3"
/db_xref="GeneID:11260"
/db_xref="HGNC:HGNC:12826"
/db_xref="MIM:603180"
CDS 86..2974
/gene="XPOT"
/gene_synonym="XPO3"
/codon_start=1
/product="exportin, tRNA (nuclear export receptor for
tRNAs)"
/protein_id="AAH20569.1"
/db_xref="GeneID:11260"
/db_xref="HGNC:HGNC:12826"
/db_xref="MIM:603180"
/translation="MDEQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQ
RTYSDDHVKFFCFQVLEHQVKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIR
NKAAQVFALLFVTEYLTKWPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVH
TSEEARRNTLIKDTMREQCIPNLVESWYQILQNYQFTNSEVTCQCLEVVGAYVSWIDL
SLIANDRFINMLLGHMSIEVLREEACDCLFEVVNKGMDPVDKMKLVESLCQVLQSAGF
FSIDQEEDVDFLARFSKLVNGMGQSLIVSWSKLIKNGDIKNAQEALQAIETKVALMLQ
LLIHEDDDISSNIIGFCYDYLHILKQLTVLSDQQKANVEAIMLAVMKKLTYDEEYNFE
NEGEDEAMFVEYRKQLKLLLDRLAQVSPELLLASVRRVFSSTLQNWQTTRFMEVEVAI
RLLYMLAEALPVSHGAHFSGDVSKASALQDMMRTLVTSGVSSYQHTSVTLEFFETVVR
YEKFFTVEPQHIPCVLMVFLDHRGLRHSSAKVRSRTAYLFSRFVKSLNKQMNPFIEDI
LNRIQDLLELSPPENGHQSLLSSDDQLFIYETAGVLIVNSEYPAERKQALMRNLLTPL
MEKFKILLEKLMLAQDEERQASLADCLNHAVGFASRTSKAFSNKQTVKQCGCSEVYLD
CLQTFLPALSCPLQKDILRSGVRTFLHRMIICLEEEVLPFIPSASEHMLKDCEAKDLQ
EFIPLINQITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPAEENDQSAALEKQMLRRSY
FAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPIAQKTCFIILSKLVELW
GGKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLALSECAVTLKTIHLKRGPE
CVQYLQQEYLPSLQVAPEIIQEFCQALQQPDAKVFKNYLKVFFQRAKP"
BASE COUNT 1085 a 633 c 750 g 1072 t
ORIGIN
1 tggagtgata gatgtttata aattcttctg tgggatcaga gggcacgcct attacaacca
61 gaaaactaca agtataacag cgaggatgga tgaacaggct ctattagggc taaatccaaa
121 tgctgattca gactttagac aaagggccct ggcctatttt gagcagttaa aaatttcccc
181 agatgcctgg caggtgtgtg cagaagctct agcccagagg acatacagtg atgatcatgt
241 gaagtttttc tgctttcaag tactggaaca tcaagttaaa tacaaatact cagaactaac
301 cactgttcaa caacagctaa ttagggagac gctcatatca tggctgcaag ctcagatgct
361 gaatccccaa ccagagaaga cctttatacg aaataaagcc gcccaagtct tcgccttgct
421 ttttgttaca gagtatctca ctaagtggcc caagtttttt tttgacattc tctcagtagt
481 ggacctaaat ccaaggggag tagatctcta cctgcgaatc ctcatggcta ttgattcaga
541 gttggtggat cgtgatgtgg tgcatacatc agaggaggct cgtaggaata ctctcataaa
601 agataccatg agggaacagt gcattccaaa tctggtggaa tcatggtacc aaatattaca
661 aaattatcag tttactaatt ctgaagtgac gtgtcagtgc cttgaagtag ttggggctta
721 tgtctcttgg atagacttat cccttatagc caatgatagg tttataaata tgctgctagg
781 tcatatgtca atagaagttc tacgggaaga agcatgtgac tgtttatttg aagttgtaaa
841 taaaggaatg gaccctgttg ataaaatgaa actagtggaa tctttgtgtc aagtattaca
901 gtctgctggg tttttcagca ttgaccagga agaagatgtt gacttcctgg ccagattttc
961 taagttggta aatggaatgg gacagtcatt gatagttagt tggagtaaat taattaagaa
1021 tggggatatt aagaatgctc aagaggcact acaagctatt gaaacaaaag tggcactgat
1081 gttgcagcta ctaattcatg aggatgatga tatttcttct aatattattg gattttgtta
1141 cgattatctt catattttga aacagcttac agtgctctcg gatcagcaaa aagctaatgt
1201 agaggcaatc atgttggccg ttatgaaaaa attgacttac gatgaagaat ataactttga
1261 aaatgagggt gaagatgaag ccatgtttgt agaatataga aaacaactga agttactgtt
1321 ggacaggctt gctcaagttt caccagagtt actactggcc tctgttcgca gagtttttag
1381 ttctacactg cagaattggc agactacacg gtttatggaa gttgaagtag caataagatt
1441 gctgtatatg ttggcagaag ctcttccagt atctcatggt gctcacttct caggtgatgt
1501 ttcaaaagct agtgctttgc aggatatgat gcgaactctg gtaacatcag gagtcagttc
1561 ctatcagcat acatctgtga cattggagtt cttcgaaact gttgttagat atgaaaagtt
1621 tttcacagtt gaacctcagc acattccatg tgtactaatg gttttcttag atcacagagg
1681 tctgcggcat tccagtgcaa aagttcggag caggacggct tacctgtttt ctagatttgt
1741 caaatctctc aataagcaaa tgaatccttt cattgaggat attttgaata gaatacaaga
1801 tttattagag ctttctccac ctgagaatgg ccaccagtcc ttactgagca gcgatgatca
1861 actttttatt tatgagacag ctggagtgct gattgttaat agtgaatatc cggcagaaag
1921 gaaacaagcc ttaatgagga atctgttgac tccactaatg gagaagttta aaattctgtt
1981 agaaaagttg atgctggcac aagatgaaga aaggcaagcc tctctagcag actgtcttaa
2041 ccatgctgtt ggatttgcaa gtcgaaccag taaagctttc agcaacaaac agactgtgaa
2101 acaatgtggc tgttccgaag tttatctgga ctgtttacag acattcttgc cagccctcag
2161 ttgtccctta caaaaggata ttctcagaag tggagtccgt actttccttc atcgaatgat
2221 tatttgcctg gaggaagaag ttcttccgtt cattccatct gcttcagaac atatgctcaa
2281 agattgtgaa gcaaaagatc tccaggagtt cattcctctt atcaaccaga ttacggccaa
2341 attcaagata caggtatccc cgtttttaca acagatgttc atgcccctgc ttcatgcaat
2401 ttttgaagtg ctgctccggc cagcagaaga aaatgaccag tctgctgctt tagagaagca
2461 gatgttgcgg aggagttact ttgctttcct gcaaacagtc acaggcagtg ggatgagcga
2521 agttatagca aatcaaggtg cagagaatgt agaaagagtg ttggttactg ttatccaagg
2581 agcagttgaa tatccagatc caattgcaca gaaaacatgt tttatcatcc tctcaaagtt
2641 ggtagaactc tggggaggta aagatggacc agtgggattt gctgattttg tttataagca
2701 cattgtcccc gcatgtttcc tagcaccttt aaaacaaacc tttgacctgg cagatgcaca
2761 aacagtattg gctttatctg agtgtgcagt gacactgaaa acaattcatc tcaaacgggg
2821 cccagaatgt gttcagtatc ttcaacaaga atacctgccc tccttgcaag tagctccaga
2881 aataattcag gagttttgtc aagcgcttca gcagcctgat gctaaagttt ttaaaaatta
2941 cttaaaggtg ttcttccaga gagcaaagcc ctgaggactg gatttccctg tgcctacttc
3001 atgatcatga attccagtta atttataaag aggcgatttt tgtgtgccat tcacactggt
3061 ctttttcaca ttgttttgag cttattgcag tatatgtttt gggatttttc tgtaaaatgg
3121 gtgtaatttt cctaatacag gtatgtaaca acaaaagaag ttgcctgcat gccggtccaa
3181 attgttctgt ataaagatgc tcttaaaaga cacaagagtt atcctagaac cttaattctt
3241 ttttatttga aattttaagt caagtccttt ataaagacca tagcagtgga aaacagtgta
3301 ctttttaaaa aattgctgaa tataaaatct ttgaaaattt tctttatgtg tgaagacaca
3361 aagtatgggg gaagacagca atcaaaacta actttttgta gatagccatt tcatttcttt
3421 aaactgtttc aacgccaata tgtattctac aaaagagaat ggttttaggc tccagtgtta
3481 tacttttttt tatatatata tataaaaata aactttacgt agtgaaaaaa aaaaaaaaaa
//