LOCUS BC020568 1911 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 54, mRNA (cDNA clone
MGC:21558 IMAGE:4158410), complete cds.
ACCESSION BC020568
VERSION BC020568.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1911)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1911)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1911
/db_xref="H-InvDB:HIT000038829"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21558 IMAGE:4158410"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1911
/gene="C10orf54"
/gene_synonym="GI24"
/db_xref="GeneID:64115"
/db_xref="HGNC:HGNC:30085"
CDS 14..949
/gene="C10orf54"
/gene_synonym="GI24"
/codon_start=1
/product="chromosome 10 open reading frame 54"
/protein_id="AAH20568.1"
/db_xref="GeneID:64115"
/db_xref="HGNC:HGNC:30085"
/translation="MGVPTALEAGSWRWGSLLFALFLAASLGPVAAFKVATPYSLYVC
PEGQNVTLTCRLLGPVDKGHDVTFYKTWYRSSRGEVQTCSERRPIRNLTFQDLHLHHG
GHQAANTSHDLAQRHGLESASDHHGNFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRV
HGAMELQVQTGKDAPSNCVVYPSSSQESENITAAALATGACIVGILCLPLILLLVYKQ
RQAASNRRAQELVRMDSNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGR
HLLSEPSTPLSPPGPGDVFFPSLDPVPDSPNFEVI"
BASE COUNT 374 a 624 c 533 g 380 t
ORIGIN
1 gtccgacggc gacatgggcg tccccacggc cctggaggcc ggcagctggc gctggggatc
61 cctgctcttc gctctcttcc tggctgcgtc cctaggtccg gtggcagcct tcaaggtcgc
121 cacgccgtat tccctgtatg tctgtcccga ggggcagaac gtcaccctca cctgcaggct
181 cttgggccct gtggacaaag ggcacgatgt gaccttctac aagacgtggt accgcagctc
241 gaggggcgag gtgcagacct gctcagagcg ccggcccatc cgcaacctca cgttccagga
301 ccttcacctg caccatggag gccaccaggc tgccaacacc agccacgacc tggctcagcg
361 ccacgggctg gagtcggcct ccgaccacca tggcaacttc tccatcacca tgcgcaacct
421 gaccctgctg gatagcggcc tctactgctg cctggtggtg gagatcaggc accaccactc
481 ggagcacagg gtccatggtg ccatggagct gcaggtgcag acaggcaaag atgcaccatc
541 caactgtgtg gtgtacccat cctcctccca ggagagtgaa aacatcacgg ctgcagccct
601 ggctacgggt gcctgcatcg taggaatcct ctgcctcccc ctcatcctgc tcctggtcta
661 caagcaaagg caggcagcct ccaaccgccg tgcccaggag ctggtgcgga tggacagcaa
721 cattcaaggg attgaaaacc ccggctttga agcctcacca cctgcccagg ggatacccga
781 ggccaaagtc aggcaccccc tgtcctatgt ggcccagcgg cagccttctg agtctgggcg
841 gcatctgctt tcggagccca gcacccccct gtctcctcca ggccccggag acgtcttctt
901 cccatccctg gaccctgtcc ctgactctcc aaactttgag gtcatctagc ccagctgggg
961 gacagtgggc tgttgtggct gggtctgggg caggtgcatt tgagccaggg ctggctctgt
1021 gagtggcctc cttggcctcg gccctggttc cctccctcct gctctgggct cagatactgt
1081 gacatcccag aagcccagcc cctcaacccc tctggatgct acatggggat gctggacggc
1141 tcagcccctg ttccaaggat tttggggtgc tgagattctc ccctagagac ctgaaattca
1201 ccagctacag atgccaaatg acttacatct taagaagtct cagaacgtcc agcccttcag
1261 cagctctcgt tctgagacat gagccttggg atgtggcagc atcagtggga caagatggac
1321 actgggccac cctcccaggc accagacaca gggcacggtg gagagacttc tcccccgtgg
1381 ccgccttggc tcccccgttt tgcccgaggc tgctcttctg tcagacttcc tctttgtacc
1441 acagtggctc tggggccagg cctgcctgcc cactggccat cgccacctta cccagctgcc
1501 tcctaccagc agtttctctg aagatctgtc aacaggttaa gtcaatctgg ggcttccact
1561 gcctgcattc cagtccccag agcttggtgg tcccgaaacg ggaagtacat attggggcat
1621 ggtggcctcc gtgagcaaat ggtgtcttgg gcaatctgag gccaggacag atgttgcccc
1681 acccactgga gatggtgctg agggaggtgg gtggggcctt ctgggaaggt gagtggagag
1741 gggcacctgc cccccgccct ccccatcccc tactcccact gctcagcgcg ggccattgca
1801 agggtgccac acaatgtctt gtccaccctg ggacacttct gagtatgaag cgggatgcta
1861 ttaaaaacta catggggaaa caggtgcaaa aaaaaaaaaa aaaaaaaaaa a
//