LOCUS BC020565 2090 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens solute carrier family 22, member 17, mRNA (cDNA clone
MGC:21554 IMAGE:4156259), complete cds.
ACCESSION BC020565
VERSION BC020565.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2090
/db_xref="H-InvDB:HIT000038826"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21554 IMAGE:4156259"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2090
/gene="SLC22A17"
/gene_synonym="BOCT"
/gene_synonym="BOIT"
/gene_synonym="hBOIT"
/gene_synonym="NGALR"
/db_xref="GeneID:51310"
/db_xref="HGNC:HGNC:23095"
/db_xref="MIM:611461"
CDS 57..1673
/gene="SLC22A17"
/gene_synonym="BOCT"
/gene_synonym="BOIT"
/gene_synonym="hBOIT"
/gene_synonym="NGALR"
/codon_start=1
/product="solute carrier family 22, member 17"
/protein_id="AAH20565.1"
/db_xref="GeneID:51310"
/db_xref="HGNC:HGNC:23095"
/db_xref="MIM:611461"
/translation="MASDPIFTLAPPLHCHYGAFPPNASGWEQPPNASGVSVASAALA
ASAASRVATSTDPSCSGFAPPDFNHCLKDWDYNGLPVLTTNAIGQWDLVCDLGWQVIL
EQILFILGFASGYLFLGYPADRFGRRGIVLLTLGLVGPCGVGGAAAGSSTGVMALRFL
LGFLLAGVDLGVYLMRLELCDPTQRLRVALAGELVGVGGHFLFLGLALVSKDWRFLQR
MITAPCILFLFYGWPGLFLESARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQE
ALQDLENTCPLPATSSFSFASLLNYRNIWKNLLILGFTNFIAHAIRHCYQPVGGGGSP
SDFYLCSLLASGTAALACVFLGVTVDRFGRRGILLLSMTLTGIASLVLLGLWDCEHPI
FPTVWAQQGNPNRDLNEAAITTFSVLGLFSSQAAAILSTLLAAEVIPTTVRGRGLGLI
MALGALGGLSGPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDG
ELCRRPSLLRQPPPTRCDHVPLLATPNPAL"
BASE COUNT 398 a 677 c 577 g 438 t
ORIGIN
1 gccagcagct gcagctcggc ctctgctgcc tgccggtgct cttcgtggct ctgggcatgg
61 cctcggaccc catcttcacg ctggcgcccc cgctgcattg ccactacggg gccttccccc
121 ctaatgcctc tggctgggag cagcctccca atgccagcgg cgtcagcgtc gccagcgctg
181 ccctagcagc cagcgccgcc agccgtgtcg ccaccagtac cgacccctcg tgcagcggct
241 tcgccccgcc ggacttcaac cattgcctca aggattggga ctataatggc cttcctgtgc
301 tcaccaccaa cgccatcggc cagtgggatc tggtgtgtga cctgggctgg caggtgatcc
361 tggagcagat cctcttcatc ttgggctttg cctccggcta cctgttcctg ggttaccccg
421 cagacagatt tggccgtcgc gggattgtgc tgctgacctt ggggctggtg ggcccctgtg
481 gagtaggagg ggctgctgca ggctcctcca caggcgtcat ggccctccga ttcctcttgg
541 gctttctgct tgccggtgtt gacctgggtg tctacctgat gcgcctggag ctgtgcgacc
601 caacccagag gcttcgggtg gccctggcag gggagttggt gggggtggga gggcacttcc
661 tgttcctggg cctggccctt gtctctaagg attggcgatt cctacagcga atgatcaccg
721 ctccctgcat cctcttcctg ttttatggct ggcctggttt gttcctggag tccgcacggt
781 ggctgatagt gaagcggcag attgaggagg ctcagtctgt gctgaggatc ctggctgagc
841 gaaaccggcc ccatgggcag atgctggggg aggaggccca ggaggccctg caggacctgg
901 agaatacctg ccctctccct gcaacatcct ccttttcctt tgcttccctc ctcaactacc
961 gcaacatctg gaaaaatctg cttatcctgg gcttcaccaa cttcattgcc catgccattc
1021 gccactgcta ccagcctgtg ggaggaggag ggagcccatc ggacttctac ctgtgctctc
1081 tgctggccag cggcaccgca gccctggcct gtgtcttcct gggggtcacc gtggaccgat
1141 ttggccgccg gggcatcctt cttctctcca tgacccttac cggcattgct tccctggtcc
1201 tgctgggcct gtgggattgt gagcatccta tcttccccac agtgtgggct caacaaggga
1261 accccaacag agatctgaac gaggctgcca tcaccacttt ctctgtcctt gggctcttct
1321 cctcccaagc tgccgccatc ctcagcaccc tccttgctgc tgaggtcatc cccaccactg
1381 tccggggccg tggcctgggc ctgatcatgg ctctaggggc gcttggagga ctgagcggcc
1441 cggcccagcg cctccacatg ggccatggag ccttcctgca gcacgtggtg ctggcggcct
1501 gcgccctcct ctgcattctc agcattatgc tgctgccgga gaccaagcgc aagctcctgc
1561 ccgaggtgct ccgggacggg gagctgtgtc gccggccttc cctgctgcgg cagccacccc
1621 ctacccgctg tgaccacgtc ccgctgcttg ccacccccaa ccctgccctc tgagcggcct
1681 ctgagtaccc tggcgggagg ctggcccaca cagaaaggtg gcaagaagat cgggaagact
1741 gagtagggaa ggcagggctg cccagaagtc tcagaggcac ctcacgccag ccatcgcgga
1801 gagctcagag ggccgtcccc accctgcctc ctccctgctg ctttgcattc acttccttgg
1861 ccagagtcag gggacaggga gagagctcca cactgtaacc actgggtctg ggctccatcc
1921 tgcgcccaaa gacatccacc cagacctcat tatttcttgc tctatcattc tgtttcaata
1981 aagacatttg gaataaacga gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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