LOCUS BC020247 1130 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 40, mRNA (cDNA clone
MGC:32020 IMAGE:4620233), complete cds.
ACCESSION BC020247
VERSION BC020247.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1130)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1130)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748622.
FEATURES Location/Qualifiers
source 1..1130
/db_xref="H-InvDB:HIT000038777"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32020 IMAGE:4620233"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1130
/gene="C19orf40"
/gene_synonym="FLJ46828"
/gene_synonym="MGC32020"
/db_xref="GeneID:91442"
/db_xref="HGNC:HGNC:28467"
CDS 92..739
/gene="C19orf40"
/gene_synonym="FLJ46828"
/gene_synonym="MGC32020"
/codon_start=1
/product="chromosome 19 open reading frame 40"
/protein_id="AAH20247.1"
/db_xref="GeneID:91442"
/db_xref="HGNC:HGNC:28467"
/translation="MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFED
GLTPDFYLSNRCCILYVTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFP
ALQKFTVLDLGMVLLPVASQMEASCLVIQLVQEQTKEPSKNPLLGKKRALLLSEPSLL
RTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQPR"
BASE COUNT 309 a 282 c 306 g 233 t
ORIGIN
1 gccaacatga tctctagact gggacggtgg ggttcctgcc ggctgtattc gggtcttgga
61 ctggactgag aatctacggt ggagaccatc catggaaaag aacccccctg atgatacggg
121 ccccgtgcac gtgcctttgg ggcatattgt ggccaatgag aaatggcgcg ggtcacagct
181 ggcgcaggag atgcaaggga aaattaagct cattttcgag gatggcttga caccagactt
241 ttatctgtcg aacagatgct gcattcttta tgtcaccgaa gctgatttgg tggcaggaaa
301 tggctacaga aagaggcttg ttcgggttag aaattccaat aatcttaaag gaattgtagt
361 cgttgaaaaa acccggatga gtgaacaata cttcccagcc ctacagaagt ttactgtgct
421 ggaccttgga atggtgctgc ttccagtggc cagccagatg gaagcatcct gcctcgtcat
481 ccagttggtt caagagcaaa ccaaagagcc cagtaagaac cctcttctcg ggaagaaacg
541 ggccctgctg ctgtctgagc cttcgctcct tcgaaccgtg cagcagatcc caggagttgg
601 aaaagttaaa gctccccttc tcctccagaa gtttccaagc atccagcaac tgagtaatgc
661 ttccattggg gaactggagc aggtggtcgg acaagcagtg gcacagcaga tccatgcctt
721 cttcacgcag cccaggtgag ggctggcctc agggccacgg catcttctcc cgagaccaca
781 aacaccagga tcttgttttc agctttaaaa accaagagaa tgggccgggt gcactggctc
841 acgcctctaa tctcagcact ttgggaggcc gaagacagcg gatcatctga ggtcaggagt
901 tcaagaccag cctggccaac atggagaaac ccctaaaaat aggaacaatt agccaggcat
961 ggtgacaggt gcctgtaatc ccagctactt gggaggccga ggcatgagaa tcacttgaac
1021 ccgggaggcg gaggttgcag tgagctgaga tcgtgccact gcactccagc ctgggcacca
1081 gagcgagact ccgtctcaaa gaaaacaaca aaaaaaaaaa aaaaaaaaaa
//