LOCUS BC020239 1686 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens phenylalanyl-tRNA synthetase 2, mitochondrial, mRNA
(cDNA clone MGC:31969 IMAGE:5258249), complete cds.
ACCESSION BC020239
VERSION BC020239.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1686)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1686)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1686
/db_xref="H-InvDB:HIT000038774"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31969 IMAGE:5258249"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1686
/gene="FARS2"
/gene_synonym="dJ520B18.2"
/gene_synonym="HSPC320"
/gene_synonym="PheRS"
/db_xref="GeneID:10667"
/db_xref="HGNC:HGNC:21062"
CDS 157..1512
/gene="FARS2"
/gene_synonym="dJ520B18.2"
/gene_synonym="HSPC320"
/gene_synonym="PheRS"
/codon_start=1
/product="phenylalanyl-tRNA synthetase 2, mitochondrial"
/protein_id="AAH20239.1"
/db_xref="GeneID:10667"
/db_xref="HGNC:HGNC:21062"
/translation="MVGSALRRGAHAYVYLVSKASHISRGHQHQAWGSRPPAAECATQ
RAPGSVVELLGKSYPQDDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYV
GRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQ
WDLLHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLF
EQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFE
MEINFHGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWC
EDERFLKQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDL
VEKVDLIDKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGR
F"
BASE COUNT 433 a 416 c 448 g 389 t
ORIGIN
1 gtcaaaatgg cagcgcccag cgtgcgcggg tatctctgaa gttggggttt aagattcttg
61 cccgtgagag cgaacgagcc tgccgtactt ctgattttga aacacctggg tctgggcttc
121 ccgggcgagc ggtggaacct gtgagaagtt tctacaatgg tgggctcagc tctcaggaga
181 ggtgcccatg catatgtcta cctggtgagt aaggccagtc acatctccag aggccatcag
241 caccaggcct ggggatcgag gcctcctgca gcagagtgtg ccacccaaag agctccaggc
301 agtgtggtgg agctgctggg caaatcctac cctcaggacg accacagcaa cctcacccgg
361 aaggtcctca ccagagttgg caggaacctg cacaaccagc agcatcaccc tctgtggctg
421 atcaaggaga gggtgaagga gcacttctac aagcagtatg tgggccgctt tgggaccccg
481 ttgttctcgg tctacgacaa cctttctcca gtggtcacga cctggcagaa ctttgacagc
541 ctgctcatcc cagctgatca ccccagcagg aagaaggggg acaactatta cctgaatcgg
601 actcacatgc tgagagcgca cacgtctgca caccagtggg acttgctgca cgcgggactg
661 gatgccttcc tggtggtggg tgatgtctac aggcgtgacc agatcgactc ccagcactac
721 cctattttcc accagctgga ggccgtgcgg ctcttctcca aacatgagtt atttgctggt
781 ataaaggatg gagaaagcct gcagctcttt gaacaaagtt ctcgctctgc gcataaacaa
841 gagacacaca ccatggaggc cgtgaagctt gtagagtttg atcttaagca aacgcttacc
901 aggctcatgg cacatctttt tggagatgag ctggagataa gatgggtaga ctgctacttc
961 ccttttacac atccttcctt tgagatggag atcaactttc atggagaatg gctggaagtt
1021 cttggctgcg gggtgatgga acaacaactg gtcaattcag ctggtgctca agaccgaatc
1081 ggctgggctt ttggcctagg attagaaagg ctagccatga tcctctacga catccctgat
1141 atccgtctct tctggtgtga ggacgagcgc ttcctgaagc agttctgtgt atccaacatt
1201 aatcagaagg tgaagtttca gcctcttagc aaatatccgg ctgtgatcaa tgatatttca
1261 ttctggttgc cctctgagaa ttacgcagaa aatgatttct atgacttagt ccgaacaatt
1321 ggaggagacc tggtggaaaa ggttgatctc atagacaagt ttgtacatcc aaagacgcac
1381 aagaccagcc actgctaccg catcacgtac cgccacatgg aacggactct gtcccagaga
1441 gaggtcaggc acatccacca ggccttgcag gaggctgcag tccagctgtt gggtgtggag
1501 ggcaggttct gatgtcacca cttcactcag gctgcagccc tcttggggct ccaggatttg
1561 ctgaaagaga aaaagatatg gtttgtgaac tggggcatca atcatctttt gataaatgga
1621 tcagttttag gactttcaga aaataaaaga tcgctcttga aaaaaaaaaa aaaaaaaaaa
1681 aaaaaa
//