LOCUS BC020221 2721 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SH3 and cysteine rich domain, mRNA (cDNA clone
MGC:31915 IMAGE:4589443), complete cds.
ACCESSION BC020221
VERSION BC020221.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2721)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2721)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: f Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507246.
FEATURES Location/Qualifiers
source 1..2721
/db_xref="H-InvDB:HIT000038761"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31915 IMAGE:4589443"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2721
/gene="STAC"
/gene_synonym="STAC1"
/db_xref="GeneID:6769"
/db_xref="HGNC:HGNC:11353"
/db_xref="MIM:602317"
CDS 150..1358
/gene="STAC"
/gene_synonym="STAC1"
/codon_start=1
/product="SH3 and cysteine rich domain"
/protein_id="AAH20221.1"
/db_xref="GeneID:6769"
/db_xref="HGNC:HGNC:11353"
/db_xref="MIM:602317"
/translation="MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRS
LSFKTKSLRSKSADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLH
PGGKAHAFHEYIFKKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCM
GKLPKGFRRYYSSPLLIHEQFGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSS
GSGSDSPHRTSTSDLVEVPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINH
QGSLSKDPLQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFF
PANFVQRLQQNEKIFRCVRTFIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKG
LIPLDVLENI"
BASE COUNT 753 a 693 c 662 g 613 t
ORIGIN
1 gaggctggag gagggcacgt cggcgcctcg gcgaggatgg gagtccccag gacccggagc
61 tgagcagcct ggcgcgcggc gggcagggcg cgcaggacag aagcctcgct gttcctccgg
121 gagcccaaca ccgttcccgc gcggccacga tgatccctcc gagcagcccc cgcgaggacg
181 gcgtggacgg gctgcccaag gaggcggtgg gcgccgagca accgccctct cctgcatcca
241 ccagcagcca ggaatccaag ctccagaaac taaaacgatc actttctttc aagaccaaga
301 gtttacggag caaaagtgct gacaacttct tccagcgaac caacagcgaa gacatgaaac
361 tgcaagcaca catggtggct gagatcagcc ccagctccag cccactccct gctccaggaa
421 gcctgacgtc cacacccgcc agggctggtc tgcatccagg tggcaaggct catgcctttc
481 atgaatacat cttcaagaag cccactttct gtgatgtctg caaccacatg atagtgggaa
541 caaatgctaa gcatggactg cgctgcaaag cctgtaagat gagcatccac cacaagtgca
601 cagatggcct ggcaccccag cggtgcatgg gcaagctgcc aaaggggttt cggcgttact
661 acagctcccc cttgctcatt catgaacagt ttggctgcat taaagaagtt atgcccattg
721 cctgtggcaa taaggtggac cctgtctacg agaccctccg cttcggcacc tccctggccc
781 agaggacaaa gaagggcagc tccggcagtg gctctgactc acctcacaga acctctactt
841 cagatcttgt ggaggttcct gaggaagcca atgggccagg aggcgggtat gacctaagga
901 aacgcagcaa cagcgtgttt acatatccag aaaatggcac tgatgatttc agagatccag
961 cgaagaacat aaaccaccag ggatctcttt ccaaagaccc attacagatg aacacctatg
1021 ttgccttgta caaatttgta ccacaggaga atgaagattt ggaaatgagg ccaggagaca
1081 taattactct tttagaggat tccaatgaag actggtggaa agggaaaatt caagacagaa
1141 ttggcttctt tccagccaac tttgttcaga gactacaaca aaatgagaag atttttagat
1201 gtgttagaac cttcattggg tgtaaggaac aggggcagat aacactgaaa gagaatcaga
1261 tctgcgtgag ttctgaagaa gaacaagatg gttttatcag agtcctcagt ggaaaaaaga
1321 aaggcctcat cccccttgat gtactagaaa acatctgatt gctggctcct cctccgtttg
1381 cagtaggcaa gctctgctgc gatgcctctg cctcatctca cactgcgtca acccaaagga
1441 gctgccgcac tgacccagcc ccccaggaaa cagtgagaca agaatcaagt atctgagact
1501 gtggagtaat agccacaaaa cagagggccc actgcacagc atatccaggc tgccacaggt
1561 ggggacgagg ctgagagagt cagcaggcag agccagatgc catgcttggc agcagcagta
1621 ggactataaa ccacagctgt cccccaggat cccactcctt tcctgtctgt gtggtgtaag
1681 ttaacacact ggagtgtgct ccagtttgca gggtagccca gtgcaaggtt cagatccatg
1741 tagctaagta ttatcctgct tccagaccta tgtcaccagt accaatcagt cagtgtcatc
1801 acatttcagg ccccaagcaa tctctgtgca aagcatcaga aagacctgct tcccagcccc
1861 cagcattcca gtgctctcca ggcttcctct ctttgtgatt gtgctgtcca gagtgtccag
1921 cttgttcttt ctttctcttc agtcctctga gtacatctgg tggtgtgcat tagatgtgag
1981 ggctatgttg acatggcatc acctccaaag acctgacctg cctaaagact gatgacaggc
2041 catccttcct gctgttctag gtactggcct gggtgacaga gcaggacatg agacatagat
2101 acagtgggga ggagaagtgg ggaaaggtgg agcagagagt tcttacttat tgaagattat
2161 acagcccttt cggttatgaa gtccctgctt gaaggcaatg gacctgggga agagactatc
2221 acaaaaagtc tccattttca ttttacatcc tctctattgg aggcagcact tttccctcat
2281 gctgtcctat aggactccac tttgaaggtt gtgcctacgt tgcagggaac taggaacatg
2341 gaggggaacc aacaacagca tcttagaaga aatgtagcca aattggagtc cattcttctt
2401 tagggcagta tatgaaatcc tagcagatgt aaaatggaaa agaatcctaa tgcttcttcc
2461 ttcagaaagt agaggaacta ggggcccaat tagcatcatc taggggaatc tctattactc
2521 tgtacttata ctaatgttta caagaatgca atatactgtg atgccttcct actcaagcct
2581 cctagcattc aaacttccat cctattagtc attaacatgg ttaaacttca attcacaatc
2641 accttggaat caatgtcagt ttgatttatt ttgttacaga gcaataaaat cattagaaca
2701 atgaaaaaaa aaaaaaaaaa a
//