LOCUS BC020220 1760 bp mRNA linear HTC 19-MAR-2007
DEFINITION Homo sapiens tumor necrosis factor (ligand) superfamily, member 10,
mRNA (cDNA clone IMAGE:4585594), containing frame-shift errors.
ACCESSION BC020220
VERSION BC020220.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1760)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1760)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: f Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23510439
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..1760
/db_xref="H-InvDB:HIT000090033"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4585594"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 615 a 355 c 373 g 417 t
ORIGIN
1 agaatagaga aggaagggct tcagtgaccg gctgcctggc tgacttacag cagtcagact
61 ctgacaggat catggctatg atggaggtcc aggggggacc cagcctggga cagacctgcg
121 tgctgatcgt gatcttcaca gtgctcctgc agtctctctg tgtggctgta acttacgtgt
181 actttaccaa cgagctgaag cagatgcagg acaagtactc caaaagtggc attgcttgtt
241 tcttaaaaga agatgacagt tattgggacc ccaatgacga agagagtatg aacagcccct
301 gctggcaagt caagtggcaa ctccgtcagc tcgttagaaa gatgattttg agaacctctg
361 aggaaaccat ttctacagtt caagaaaagc aacaaaatat ttctccccta gtgagagaaa
421 gaggtcctca gagagtagca gctcacataa ctgggaccag aggaagaagc aacacattgt
481 cttctccaaa ctccaagaat gaaaaggctc tgggccgcaa aataaactcc tgggaatcat
541 caaggagtgg gcattcattc ctgagcaact tgcacttgag gaatggtgaa ctggtcatcc
601 atgaaaaagg gttttactac atctattccc aaacatactt tcgatttcag gaggaaataa
661 aagaaaacac aaagaacgac aaacaaatgg tccaatatat ttacaaatac acaagttatc
721 ctgaccctat attgttgatg aaaagtgcta gaaatagttg ttggtctaaa gatgcagaat
781 atggactcta ttccatctat caagggggaa tatttgagct taaggaaaat gacagaattt
841 ttgtttctgt aacaaatgag cacttgatag acatggacca tgaagccagt ttttttcggg
901 gcctttttag ttggctaact gacctggaaa gaaaaagcaa taacctcaaa gtgactattc
961 agttttcagg atgatacact atgaagatgt ttcaaaaaat ctgaccaaaa caaacaaaca
1021 gaaaacagaa aacaaaaaaa cctctatgca atctgagtag agcagccaca accaaaaaat
1081 tctacaacac acactgttct gaaagtgact cacttatccc aagaaaatga aattgctgaa
1141 agatctttca ggactctacc tcatatcagt ttgctagcag aaatctagaa gactgtcagc
1201 ttccaaacat taatgcaatg gttaacatct tctgtcttta taatctactc cttgtaaaga
1261 ctgtagaaga aagcgcaaca atccatctct caagtagtgt atcacagtag tagcctccag
1321 gtttccttaa gggacaacat ccttaagtca aaagagagaa gaggcaccac taaaagatcg
1381 cagtttgcct ggtgcagtgg ctcacacctg taatcccaac attttgggaa cccaaggtgg
1441 gtagatcacg agatcaagag atcaagacca tagtgaccaa catagtgaaa ccccatctct
1501 actgaaagtg caaaaattag ctgggtgtgt tggcacatgc ctgtagtccc agctacttga
1561 gaggctgagg caggagaatc gtttgaaccc gggaggcaga ggttgcagtg tggtgagatc
1621 atgccactac actccagcct ggcgacagag cgagacttgg tttcaaaaaa aaaaaaaaaa
1681 aaaacttcag taagtacgtg ttattttttt caataaaatt ctattacagt aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa
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