LOCUS BC020200 1237 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens calneuron 1, mRNA (cDNA clone MGC:31789 IMAGE:3944302), complete cds. ACCESSION BC020200 VERSION BC020200.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1237) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1237) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: b Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 63054821. FEATURES Location/Qualifiers source 1..1237 /db_xref="H-InvDB:HIT000038747" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:31789 IMAGE:3944302" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1237 /gene="CALN1" /db_xref="GeneID:83698" /db_xref="HGNC:HGNC:13248" /db_xref="MIM:607176" CDS 300..959 /gene="CALN1" /codon_start=1 /product="calneuron 1" /protein_id="AAH20200.1" /db_xref="GeneID:83698" /db_xref="HGNC:HGNC:13248" /db_xref="MIM:607176" /translation="MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREA FRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILG PKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINE EESLNETSGNCQTEFEGVHSQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGM E" BASE COUNT 286 a 331 c 382 g 238 t ORIGIN 1 gacaaggaca gggaggcacg cgcccagatc gcgctccgag tcgacgaggg ggctcgtgca 61 ggtcccggcg cgcgcgtggg gagcggcccg ggggcgccga gggagccggc ggcagcgagg 121 atgccggcac ggggacgcgg ctgcctgctg ggggtgtgag cgagaggctg agcgctgccc 181 gctcggcgca tccattccgc accgccccct ccctgcgggc ctcggaggaa gccccccgcg 241 ctgtgcggag gcgcctcggc tgccgggctg cggagccccg gcccagcaag agggaaaaga 301 tgccgttcca ccatgtgacc gccggcttgt tgtacaaggg gaattacctc aaccgatcgc 361 tctctgctgg cagtgacagc gaacagctgg ctaatatctc cgtggaggag ctcgatgaaa 421 tccgagaggc ctttcgggtt ctggaccggg atgggaacgg cttcatctcc aagcaggagc 481 tgggcatggc catgcgctct ttggggtaca tgccaagcga ggtggagctg gccatcatca 541 tgcagcgctt ggacatggac ggggatggcc aggtggattt tgatgaattc atgaccattc 601 ttggccccaa actggtgtct tcagaaggtc gcgatggttt tcttgggaac acgatagaca 661 gcatattctg gcagtttgac atgcaaagga taactctgga agagttgaag cacattctct 721 atcatgcctt ccgagaccac ctaacgatga aggacattga gaacatcatt atcaatgagg 781 aagagagcct gaatgagacc tcggggaact gccaaacaga gtttgaagga gtgcattccc 841 agaagcagaa cagacagacc tgcgtccgga agagcctcat atgcgccttt gctatggcct 901 tcatcatcag tgtcatgctg attgcagcca accagatact ccggagcggc atggagtagc 961 agcctcccgc cagccacact gtgttgcagc tcaccgcgca tgtgcatgcc gtgcgggcag 1021 actcttcctc cacacagcag acacggacct atggactatg gatggatgcg gacgatggaa 1081 ccgttcagta aagaacccaa ggttgagtgc aactggggtt gcacttcagc ttcatctcct 1141 tggcagggac actaaagggc tgtcttcagt gctttaatgg ttttgttttc taatgcaata 1201 aatcgccagg atttccaaaa aaaaaaaaaa aaaaaaa //