LOCUS BC020199 1478 bp mRNA linear HUM 27-MAY-2005
DEFINITION Homo sapiens cleavage and polyadenylation specific factor 3-like,
mRNA (cDNA clone MGC:31782 IMAGE:4642543), complete cds.
ACCESSION BC020199
VERSION BC020199.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1478)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149862.
FEATURES Location/Qualifiers
source 1..1478
/db_xref="H-InvDB:HIT000038746"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31782 IMAGE:4642543"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1478
/gene="CPSF3L"
/gene_synonym="CPSF73L"
/gene_synonym="FLJ13294"
/gene_synonym="FLJ20542"
/gene_synonym="RC-68"
/gene_synonym="RC68"
/db_xref="GeneID:54973"
CDS 37..1206
/gene="CPSF3L"
/gene_synonym="CPSF73L"
/gene_synonym="FLJ13294"
/gene_synonym="FLJ20542"
/gene_synonym="RC-68"
/gene_synonym="RC68"
/codon_start=1
/product="CPSF3L protein"
/protein_id="AAH20199.1"
/db_xref="GeneID:54973"
/translation="MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRR
FPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPI
LLEDYRKIAVDKKGEANFFTSQMIKDCILLETFWERMNLKVPIYFSTGLTEKANHYYK
LFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFR
KWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAK
GIMQLVSSEQALKELGLAEHQLRFTCRVHLHDTRKEQETALRVYSHLKSVLKDHCVQH
LPDGSVTVESVLLQAAAPSEDPGTKVLLVSWTYQDEELGSFLTSLLKKGLPQAPS"
BASE COUNT 326 a 464 c 420 g 268 t
ORIGIN
1 ggcgggcctc gcgggtccgg gagcgcggcg gagacgatgc ctgagatcag agtcacgccc
61 ttgggggccg gccaggacgt gggccgaagc tgcatcctgg tctccattgc gggcaagaat
121 gtcatgctgg actgtggaat gcacatgggc ttcaatgacg accgacgctt ccctgacttc
181 tcctacatca cccagaacgg ccgcctaaca gacttcctgg actgtgtgat cattagccac
241 ttccacctgg accactgcgg ggcactcccc tacttcagcg agatggtggg ctacgacggc
301 cccatctaca tgactcaccc cacccaggcc atctgcccca tcttgctgga ggactaccgc
361 aagatcgccg tagacaagaa gggcgaggcc aacttcttca cctcccagat gatcaaagac
421 tgcatcctcc tggagacctt ctgggagcgc atgaacctga aggtgcccat ctacttctcc
481 acggggctga ccgagaaggc caaccactac tacaagctgt tcatcccctg gaccaaccag
541 aagatccgca agacttttgt gcagaggaac atgtttgagt tcaagcacat caaggccttc
601 gaccgggctt ttgctgacaa cccaggaccg atggttgtgt ttgccacgcc aggaatgctg
661 cacgctgggc agtccctgca gatcttccgg aaatgggccg gaaacgaaaa gaacatggtc
721 atcatgcccg gctactgcgt gcagggcacc gtcggccaca agatcctcag cgggcagcgg
781 aagctcgaga tggaggggcg gcaggtgctg gaggtcaaga tgcaggtgga gtacatgtca
841 ttcagcgcac acgcggacgc caagggcatc atgcagctgg tgtcctcaga gcaagccctc
901 aaagagctgg gtctggctga gcaccagctg cgcttcacct gccgcgtgca cctgcatgac
961 acacgcaagg agcaggagac ggcattgcgc gtctacagcc acctcaagag cgtcctgaag
1021 gaccactgtg tgcagcacct cccggacggc tctgtgactg tggagtccgt cctcctccag
1081 gccgccgccc cttctgagga cccaggcacc aaggtgctgc tggtctcctg gacctaccag
1141 gacgaggagc tggggagctt cctcacatct ctgctgaaga agggcctccc ccaggccccc
1201 agctgaggcc ggcaactcac ccagccgcca cctctgccct ctcccagctg gacagaccct
1261 gggcctgcac ttcaggactg tgggtgccct gggtgaacag accctgcagg tcccatccct
1321 ggggacagag gccttgtgtc acctgcctgc ccaggcagct gtttgcagct gaagaaacaa
1381 actggtctcc aggctgtctt gcctttattc ctggttaggg caggtggtcc tagacagcag
1441 tttccagtaa aagctgaaca aaaaaaaaaa aaaaaaaa
//