LOCUS BC020197 2170 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens 1-aminocyclopropane-1-carboxylate synthase homolog
(Arabidopsis)(non-functional), mRNA (cDNA clone MGC:31771
IMAGE:3632065), complete cds.
ACCESSION BC020197
VERSION BC020197.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2170)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2170)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14211920.
FEATURES Location/Qualifiers
source 1..2170
/db_xref="H-InvDB:HIT000038744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31771 IMAGE:3632065"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2170
/gene="ACCS"
/gene_synonym="ACS"
/gene_synonym="PHACS"
/db_xref="GeneID:84680"
/db_xref="HGNC:HGNC:23989"
/db_xref="MIM:608405"
CDS 415..1920
/gene="ACCS"
/gene_synonym="ACS"
/gene_synonym="PHACS"
/codon_start=1
/product="1-aminocyclopropane-1-carboxylate synthase
homolog (Arabidopsis)(non-functional)"
/protein_id="AAH20197.1"
/db_xref="GeneID:84680"
/db_xref="HGNC:HGNC:23989"
/db_xref="MIM:608405"
/translation="MFTLPQKDFRAPTTCLGPTCMQDLGSSHGEDLEGECSRKLDQKL
PELRGVGDPAMISSDTSYLSSRGRMIKWFWDSAEEGYRTYHMDEYDEDKNPSGIINLG
TSENKLCFDLLSWRLSQRDMQRVEPSLLQYADWRGHLFLREEVAKFLSFYCKSPVPLR
PENVVVLNGGASLFSALATVLCEAGEAFLIPTPYYGAITQHVCLYGNIRLAYVYLDSE
VTGLDTRPFQLTVEKLEMALREAHSEGVKVKGLILISPQNPLGDVYSPEELQEYLVFA
KRHRLHVIVDEVYMLSVFEKSVGYRSVLSLERLPDPQRTHVMWATSKDFGMSGLRFGT
LYTENQDVATAVASLCRYHGLSGLVQYQMAQLLRDRDWINQVYLPENHARLKAAHTYV
SEELRALGIPFLSRGAGFFIWVDLRKYLLKGTFEEEMLLWRRFLDNKVLLSFGKAFEC
KEPGWFRFVFSDQVHRLCLGMQRVQQVLAGKSQVAEDPRPSQSQEPSDQRR"
BASE COUNT 442 a 628 c 615 g 485 t
ORIGIN
1 ccgagtgcca gcaccgcctc ctccagctcc gccaagtagg tgggatccac tactttgcag
61 aggaggaagc cgttcaggcc tccctctgtg cactttgcaa aagcctctgc ccttccatct
121 cgaatccctt ggcgccgatc acacttcctc tgcctggaaa cctggagccg tctctcgcga
181 gacgtcctcc gccctgtaga aggccgtttc ggttcttcgt gcgcggtagc cgccccactt
241 gcgggattcc aaggcctcat cgagtgcggg tatctggctg tggattcgcc gccgtcctgc
301 tggacgcctg gaggctcgaa ccccgccgcc cccctacccc aggctttact cccaccccgg
361 cttccgccca ctgtgctgcc cttcctcgga cctgggctgt cgggagagct ggagatgttc
421 acccttcctc aaaaggactt cagggctccc accacctgtc tgggccccac ctgcatgcag
481 gacctgggca gtagccatgg ggaagatctg gaaggagaat gctccagaaa actggaccag
541 aagctgccag agctccgtgg agtgggtgat cctgccatga tctcctctga tacctcctac
601 ctgtcctcta gaggaagaat gattaaatgg ttctgggatt cagctgagga gggctacagg
661 acctaccaca tggatgagta tgatgaggac aagaacccca gtggcatcat taacttgggc
721 accagtgaga acaaactctg ctttgacctg ctgtcctggc ggctgagtca gcgcgacatg
781 cagagggtgg agccatccct gctgcagtat gctgactgga ggggacatct gttcctccgg
841 gaggaagtgg ccaagttcct gtctttctac tgcaagagcc cagtacccct cagaccagag
901 aatgtggttg tcctgaatgg tggtgcctcg ctcttctctg ctctggccac ggtgctgtgt
961 gaggccgggg aggctttcct gatccccacc ccttactatg gcgctatcac acagcacgtg
1021 tgtctctatg gcaacatccg gctggcctat gtctacctgg acagtgaggt cactgggcta
1081 gacacacgcc ccttccagct cacagtggag aagctggaga tggccctgag agaagctcac
1141 tctgagggtg tgaaggtcaa aggcctcatc ctcatcagcc cccagaaccc tctgggtgat
1201 gtatactccc ctgaagagct acaggagtac ctggtatttg ccaagaggca caggctgcat
1261 gtgattgtgg atgaggtcta catgttgtcc gtgtttgaga agtctgttgg gtaccgcagt
1321 gtcctaagcc tggaaaggct ccctgacccc cagaggaccc atgtgatgtg ggcaaccagc
1381 aaggacttcg ggatgtctgg gctccgcttt ggcacgctgt acacagaaaa ccaggatgtg
1441 gccactgccg tggcttccct ctgccgctac cacggcctca gtggcttggt ccagtaccag
1501 atggcacagc tgctccggga ccgtgactgg atcaaccagg tgtacctgcc ggaaaaccat
1561 gcccggctca aggctgccca cacctatgtc tcagaagagc ttagggcatt ggggatcccc
1621 ttcttgagtc gtggggctgg cttcttcatc tgggttgact tgagaaagta cctgctcaag
1681 ggcacctttg aggaggaaat gctgctctgg cgccgctttt tggacaacaa ggtgctgctg
1741 tcctttggca aggccttcga gtgtaaagag cctggttggt ttcgctttgt cttctcagac
1801 caggtccacc ggctttgcct ggggatgcag agggtccagc aggtgcttgc aggcaaatcc
1861 caagtggcag aagacccccg tccctctcag agccaggagc caagtgacca acgcaggtga
1921 gctggtcatt gtctcgtggc cagagggccc agcagccact gtggacctgg ggcgttctgg
1981 ggctgcagaa gactgactgt ggatgtgcca tttgccagga aggtatctaa cttggctttg
2041 tgcctgaaga actgtttctt gtctttcgct gtagcagtgg gaaactcctt aagctgtggt
2101 tcagcctggg ccctccctct ctcctattaa acaaaactag gagagtcaaa aaaaaaaaaa
2161 aaaaaaaaaa
//