LOCUS BC020172 3105 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger and BTB domain containing 2, mRNA (cDNA
clone MGC:20189 IMAGE:4577244), complete cds.
ACCESSION BC020172
VERSION BC020172.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3105)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3105)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308240.
FEATURES Location/Qualifiers
source 1..3105
/db_xref="H-InvDB:HIT000050734"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20189 IMAGE:4577244"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3105
/gene="ZBTB2"
/gene_synonym="ZNF437"
/db_xref="GeneID:57621"
/db_xref="HGNC:HGNC:20868"
CDS 136..1680
/gene="ZBTB2"
/gene_synonym="ZNF437"
/codon_start=1
/product="zinc finger and BTB domain containing 2"
/protein_id="AAH20172.1"
/db_xref="GeneID:57621"
/db_xref="HGNC:HGNC:20868"
/translation="MDLANHGLILLQQLNAQREFGFLCDCTVAIGDVYFKAHKSVLAS
FSNYFKMLFVHQTSECVRLKPTDIQPDIFSYLLHLMYTGKMAPQLIDPVRLEQGIKFL
HAYPLIQEASLASQGAFSHPDQVFPLASSLYGIQIADHQLRQATKIASAPEKLGRDPR
PQTSRISQEQVPEASQLSQLTSNLAQVNRTNMTPSDPLQTSLSPELVSTPVPPPPPGE
ETNLEASSSDEQPASLTIAHVKPSIMKRNGSFPKYYACHLCGRRFTLRSSLREHLQIH
TGVPFTSSQQGESRVPLTLCSNAADLGKDAMEVPEAGMISDSELQHISDSPIIDGQQQ
SETPPPSDIADIDNLEQADQEREVKRRKYECTICGRKFIQKSHWREHMYIHTGKPFKC
STCDKSFCRANQAARHVCLNQSIDTYTMVDKQTLELCTFEEGSQMDNMLVQTNKPYKC
NLCDKTFSTPNEVVKHSCQNQNSDVFALDEGRSILLGSGDSEVTEPDHPVLASIKKEQ
ETVLLD"
BASE COUNT 928 a 726 c 654 g 797 t
ORIGIN
1 cgcggcggca gcagcagcag cagcagcgag aggcagaggc ggcggcggcg gggaggacag
61 cacggccgag gctgcccagc ggcgcctcct ccacaccccc cgccgcagca gcaccggcga
121 cagatttttt aaaaaatgga tttggccaac catggactta ttctactgca acagttaaac
181 gctcagcgag agtttggttt cctgtgtgac tgcacggttg caatcggcga tgtatacttc
241 aaggcacaca aatcagttct tgcttcattc tccaattact ttaagatgtt gtttgtccat
301 cagaccagtg agtgtgtccg cttgaaacca actgacatac agcccgacat cttcagctat
361 ctcttacact tgatgtacac tgggaagatg gcgcctcagc tcatcgaccc ggttcgatta
421 gaacagggca tcaagtttct gcacgcctac ccgctcattc aggaagccag cctcgccagc
481 cagggagcct tttctcaccc tgaccaagtt ttcccactgg cttcttcatt gtatggcatt
541 cagattgcag atcatcagtt gagacaagcc accaagattg cttcagcacc tgaaaaactc
601 gggcgagatc cacggccaca gacctccagg ataagccagg agcaggtccc tgaggcctca
661 cagctctccc agctgacttc aaatctggcc caggtgaatc ggacaaatat gactccctca
721 gaccccctgc agacctcgct gtctccagaa cttgtttcca ctcctgttcc tccccctcct
781 cccggggagg agaccaatct ggaagcatct tcctccgatg agcagcctgc gtccctcaca
841 atagcccacg tcaagccaag catcatgaag aggaatggga gctttccaaa gtactatgcc
901 tgccacctgt gtggacggcg cttcactctc cggagcagct tacgtgaaca cctccagatc
961 cacacaggag tacctttcac atctagccaa cagggagaaa gtcgcgtccc cctgactctc
1021 tgtagcaatg cagctgacct cgggaaagat gccatggaag tgcctgaagc cgggatgata
1081 agtgacagtg agctgcagca catctctgat tctcccatca tcgatgggca gcagcagtcg
1141 gaaaccccac ccccctcaga cattgctgac attgacaacc tggagcaggc cgaccaggag
1201 agggaggtga agaggcggaa gtacgagtgc acaatatgtg gacgcaaatt tatccagaaa
1261 agccactgga gggaacacat gtacatacac accgggaagc ctttcaagtg cagcacttgt
1321 gacaaaagct tttgcagggc caaccaggct gcccgccacg tgtgcctcaa ccagagcatc
1381 gacacttaca ccatggtgga caaacagact ctggaactct gcacatttga ggaagggagt
1441 cagatggaca acatgctggt gcaaacaaac aaaccctaca aatgcaactt gtgtgacaaa
1501 acattctcca ctcccaatga ggttgttaaa cattcatgcc aaaaccagaa ctcggatgtt
1561 tttgccctag acgaagggcg atccattctc ctgggcagtg gggactcgga agtaacggag
1621 cctgaccacc cagtgttagc ttccatcaaa aaggaacaag aaaccgtctt actagactga
1681 atgtcactta tctttttaaa aaactctcat ttttacaaag actatcttcc ctcccttccc
1741 tgaattcaga actgtagttc tccatggcat gatacaaaca ggtccttgtt ctcttctcct
1801 cttccccttt tccacatccc agccccacct ctgtaaaggc tttgtgcatt ataaacctgg
1861 aatgtatcga ctttctttca ggggatattg gaaagataat ggtcattata cttataaact
1921 caaattttga gaggttttag attattcaga agcatacttg gaactaatga agggtatata
1981 ataaaacaac tggaatccaa tttggtaagc taaaattatg actttccctg ggtaaaaagt
2041 cttctcagaa aaacaatgtc agaaaataac agcgtgctgc ttagaaatac ggctgggctc
2101 tgtactatgc aaaatctaga aagtgtgggg aaactttaaa cccaagaaaa cgttcttagt
2161 attcatcctc caggtgtctt acttcagaat gcatcctttg agattatgtc cacttaagag
2221 aaatcatcag ttaagaaatc tactttaaca aaacaaaaag gagaaaaagt aataatgtga
2281 tggcaatctt aatttttggg tacaacatga caagctgtga gtttgtgtgt ttgtaagaga
2341 aaaatgtgtg ggtacttgct aataaacagg tgaattaatg cacatcctta tctcattgct
2401 ggcttctttc caagttgagc aacaacaaaa tgctgtattt gagtttctga caaatttgtt
2461 ttaaaaatca aatttgaatg tactattcta taaattgcct ttctgaatag aacatgacat
2521 gccattttct agcagctgcc agtgataatt tgttttacac taacttttaa atcagtgtgt
2581 gtactgcagg gaaaaggata taggaatact catcttacag gggaatttgt gaccagaaga
2641 tgtagtaact tcaatgactg aaagtcaatg ctgatagttt actggcaaca ttaattgaag
2701 catcaaaaat aaatggcaaa gagaaatcag gacaaaaaat ctaattgctg tttgggaaaa
2761 aacttgattt tgatgtttat tctccaggtt tttggttgtt tttttttctt tcttctttct
2821 taatgcctga aattttctcc attggcccga aagcagtaaa aattgttcat taatcttccg
2881 ttaggccaat aaaagaaggg cctcacaaga caaaacagga gccagaagta aggactgaag
2941 gagaagggga gaatagctaa tagctatagt atatgtatat gttaaaaact gaatatccca
3001 tcatcctatt tcatgtatag ttgagttctc aaatttgtaa gtttttatac atcctttcat
3061 tgaataaacg tttaattaaa tgagtaaaaa aaaaaaaaaa aaaaa
//