LOCUS BC020079 3759 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lamin B receptor, mRNA (cDNA clone MGC:9041
IMAGE:3925138), complete cds.
ACCESSION BC020079
VERSION BC020079.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3759)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3759)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: g Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37595749.
FEATURES Location/Qualifiers
source 1..3759
/db_xref="H-InvDB:HIT000038730"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9041 IMAGE:3925138"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3759
/gene="LBR"
/gene_synonym="DHCR14B"
/gene_synonym="LMN2R"
/gene_synonym="MGC9041"
/gene_synonym="PHA"
/gene_synonym="PRO0650"
/db_xref="GeneID:3930"
/db_xref="HGNC:HGNC:6518"
/db_xref="MIM:600024"
CDS 97..1944
/gene="LBR"
/gene_synonym="DHCR14B"
/gene_synonym="LMN2R"
/gene_synonym="MGC9041"
/gene_synonym="PHA"
/gene_synonym="PRO0650"
/codon_start=1
/product="lamin B receptor"
/protein_id="AAH20079.1"
/db_xref="GeneID:3930"
/db_xref="HGNC:HGNC:6518"
/db_xref="MIM:600024"
/translation="MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDG
TELELKENDIKPLTSFRQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASH
QADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESS
YIATQYSLRPRREEVKLKEIDSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLI
MFGLPVFLFLLLLMCKQKDPSLLNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLP
IGKVVEGTPLIDGRRLKYRLNGFYAFILTSAVIGTSLFQGVEFHYVYSHFLQFALAAT
VFCVVLSVYLYMRSLKAPRNDLSPASSGNAVYDFFIGRELNPRIGTFDLKYFCELRPG
LIGWVVINLVMLLAEMKIQDRAVPSLAMILVNSFQLLYVVDALWNEEALLTTMDIIHD
GFGFMLAFGDLVWVPFIYSFQAFYLVSHPNEVSWPMASLIIVLKLCGYVIFRGANSQK
NAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNH
ILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWEKYCQRVPYRIFPYIY"
BASE COUNT 1067 a 652 c 770 g 1270 t
ORIGIN
1 gtcgcgcgcg tggatctgcc gccgggttgc tgtgcgacta ttctccggga gccgtccgtg
61 tcaccgccgg aacctggcgc aggttaatta tagaaaatgc caagtaggaa atttgccgat
121 ggtgaagtgg taagaggtcg atggcctggg agttcacttt attatgaagt agaaattctg
181 agccacgaca gcacctccca gctttacact gtgaagtata aagatggaac agagcttgaa
241 ttgaaagaga atgatattaa gcctttaact tcctttaggc aaaggaaagg tggctcaact
301 tccagttccc cttccagacg ccgagggagt cgatcaaggt cacgctcccg atcccctggt
361 cgaccaccta aaagtgcccg ccgatctgct tctgcttccc accaggccga cattaaggaa
421 gcaaggaggg aagtggaagt taaattgact ccgctgattc tgaagccatt tggaaatagc
481 atcagcagat ataatgggga gcctgagcat attgagagaa atgacgcacc tcataaaaat
541 acacaggaaa aattcagttt gtcacaagaa agcagttaca tagcaacaca gtatagcctt
601 cgtccaagaa gagaagaagt caaattaaaa gaaatagatt ctaaggaaga aaaatacgtt
661 gcaaaagaac tggcagtgag aacctttgaa gtgaccccca tccgggcaaa ggacttggag
721 tttggaggag tacctggtgt gtttctcatc atgtttggcc tgcctgtgtt cctcttcctg
781 ttgctgttga tgtgtaaaca gaaagatccc agtcttctga atttccctcc tcctttgcca
841 gctttgtatg agttatggga aaccagagta tttggggtct acctcctgtg gtttttgatt
901 caagtcctgt tctacctact gccaattgga aaggttgtag aaggaacgcc tcttattgat
961 ggaagaagac tcaagtatag attaaatgga ttctatgctt ttatcctgac atctgcagtc
1021 atcggaacat ctctcttcca gggcgtagag tttcattacg tgtacagtca ttttcttcag
1081 tttgcacttg cggccactgt tttttgtgtg gtcttgagtg tgtatctcta catgcgctct
1141 ttgaaagcgc cccggaatga cctgtcgcct gccagctctg gaaatgctgt ctatgatttc
1201 ttcattggcc gtgaattaaa ccctcgaatt ggtacttttg atctcaaata cttttgtgaa
1261 ttgcgccccg gattgattgg atgggtggtt attaacttgg tgatgctttt ggctgaaatg
1321 aaaatacagg accgcgctgt tccatccttg gccatgattt tagttaatag tttccagctt
1381 ctctatgtgg tggatgctct ctggaatgag gaagcgttgt tgacgaccat ggacatcatc
1441 cacgatggat ttggattcat gctggctttt ggagacttgg tgtgggttcc ctttatttac
1501 agcttccaag ccttttattt agtcagtcat ccaaatgaag tgtcttggcc aatggcttct
1561 ctaattattg ttctgaaact ttgtggttat gtaatcttcc gaggtgcaaa ttctcagaaa
1621 aatgcattcc ggaaaaatcc cagtgatcca aagcttgcac atttaaaaac cattcatact
1681 tcaacgggaa aaaatcttct agtttctgga tggtggggct ttgttcgcca ccccaattac
1741 ttgggtgatc tcatcatggc cttggcgtgg tccctcccat gtggttttaa ccacattctg
1801 ccttatttct acataattta tttcaccatg ttgcttgtcc accgagaagc tcgtgacgag
1861 taccactgta agaagaaata cggcgtggct tgggaaaagt actgtcagcg tgtgccctac
1921 cgtatatttc catacatcta ctaatgctct tctggctttt ctacaaaata ctcctgcaat
1981 tccagctgcc atttgcaaaa acaaggaaaa aaatccgaaa ctttcttttg ttgcactgac
2041 agggtctgta cttttttttt tctttttgag tcaggactat ggagccgagt agttgatctt
2101 ttaatatagc cgtgtttact tgtattaact tacagttaac ataggaaaaa tacaagtaag
2161 gatgtgagaa tttgcatttt aatgggaaat tttcaaccgt taatctgaaa acagaagaca
2221 gtcttaatat aaatgtactg tgaagaatgc tattgatgtt tatggtttct gattactttt
2281 caaattttga tgtttttttg ccagttggct tttcttaaat gaaaacactg ttccatttaa
2341 agtacattta tgttttattc agtaagagaa tagaattttc atttgttttt ctttaaatcc
2401 tttactaatt atataatttg aaagcaaaaa gaagggccta tattaaatgc tgaaagtgaa
2461 aagtgatgac attattagca gacactgctt aaaggagacc atttgtagca gttggcttaa
2521 cctcaacttc taaaactaca ttgaaaatgt aaatacatag cttagttttt tgtaatatat
2581 ggtgacttca gatttttttg tacagtattt tgaatgtgag atgattgtca ggactaactg
2641 tctttttaac aaaacatttt cagtaaatta aataaaattt tgtaaagtaa tgtgaattaa
2701 aaattttgga acaattagaa ttcattcact attgtataga agatgctgtt aaaacatagg
2761 aagggtattt ttcttgatcc aaagtttgtg aatttggctt tgctacctca attgcaggtg
2821 tttgtttgcc tttataaact gttgcaaata gaaaaaaaat agaataagta tatatttttg
2881 gagtaacatc aatatttaaa catttttaca cagatcggtg tttgaaaatt tgccatttca
2941 ggctaatatt tttatatatt tttgactttt taaaagttca tcagtgtttt tgctactgtt
3001 aagcttatgc agtttatact gtatttttta tgtatccttt atatttacca aacctgactc
3061 cctgtaaagg agtgctgtct taaaaacaac tgaaggggtt aaagtcgttt cttttagttt
3121 aatagatgtg cataaggtag ctttagcaat taaattctag tgaagttgat atagtctcat
3181 ttttaattgt cctgtaatgg aacagtagca aattcactaa acttttgtgt tcagagttaa
3241 attgttctca gtactttcaa tgtaggggaa tgtaataaac atagtgtgta tgtttgggtt
3301 ttaattacac attttatata tgagccattt agatatgcag tgttaattct atactgcatt
3361 tgaagtgtat gtaacttagc ttatgttaat gcagtcatga agttggtttg ctccagcatc
3421 cggtagtctt taaacattct tttagtgaaa ttgtcattgt tttatcagtg ctaatatgtg
3481 caagcagttt ttttattttg cttttctcct ggcatcagaa agtggtggcg ttttctgtac
3541 tggattgcac caaggaagct tttggggagg aaggaaggac attaaattct ttccctggta
3601 atgaaaagag ccctttatca atacagtgct gcaatttctg gatatcagct acactttgtt
3661 tttaagtttg tttttgacat gtttatttgg caaattttat aatgaagttt taagttgaaa
3721 ataaaatgta gcaacatttt gatcaaaaaa aaaaaaaaa
//