LOCUS BC019827 1232 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 1, mRNA (cDNA clone MGC:29935 IMAGE:4152608), complete cds. ACCESSION BC019827 VERSION BC019827.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1232) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1232) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: a Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5453689. FEATURES Location/Qualifiers source 1..1232 /db_xref="H-InvDB:HIT000038689" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29935 IMAGE:4152608" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1232 /gene="DNAJB1" /gene_synonym="Hsp40" /db_xref="GeneID:3337" /db_xref="HGNC:HGNC:5270" /db_xref="MIM:604572" CDS 25..1047 /gene="DNAJB1" /gene_synonym="Hsp40" /codon_start=1 /product="DnaJ (Hsp40) homolog, subfamily B, member 1" /protein_id="AAH19827.1" /db_xref="GeneID:3337" /db_xref="HGNC:HGNC:5270" /db_xref="MIM:604572" /translation="MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEK FKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMF AEFFGGRNPFDTFFGQRNGEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQ DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKI TFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTL DGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVL EQVLPI" BASE COUNT 328 a 332 c 335 g 237 t ORIGIN 1 gtcggcgggc cgcaggaggg ggtcatgggt aaagactact accagacgtt gggcctggcc 61 cgcggcgcgt cggacgagga gatcaagcgg gcctaccgcc gccaggcgct gcgctaccac 121 ccggacaaga acaaggagcc cggcgccgag gagaagttca aggagatcgc tgaggcctac 181 gacgtgctca gcgacccgcg caagcgcgag atcttcgacc gctacgggga ggaaggccta 241 aaggggagtg gccccagtgg cggtagcggc ggtggtgcca atggtacctc tttcagctac 301 acattccatg gagaccctca tgccatgttt gctgagttct tcggtggcag aaatcccttt 361 gacacctttt ttgggcagcg gaacggggag gaaggcatgg acattgatga cccattctct 421 ggcttcccta tgggcatggg tggcttcacc aacgtgaact ttggccgctc ccgctctgcc 481 caagagcccg cccgaaagaa gcaagatccc ccagtcaccc acgaccttcg agtctccctt 541 gaagagatct acagcggctg taccaagaag atgaaaatct cccacaagcg gctaaacccc 601 gacggaaaga gcattcgaaa cgaagacaaa atattgacca tcgaagtgaa gaaggggtgg 661 aaagaaggaa ccaaaatcac tttccccaag gaaggagacc agacctccaa caacattcca 721 gctgatatcg tctttgtttt aaaggacaag ccccacaata tctttaagag agatggctct 781 gatgtcattt atcctgccag gatcagcctc cgggaggctc tgtgtggctg cacagtgaac 841 gtccccactc tggacggcag gacgataccc gtcgtattca aagatgttat caggcctggc 901 atgcggcgaa aagttcctgg agaaggcctc cccctcccca aaacacccga gaaacgtggg 961 gacctcatta ttgagtttga agtgatcttc cccgaaagga ttccccagac atcaagaacc 1021 gtacttgagc aggttcttcc aatatagcta tctgagctcc ccaaggactg accagggacc 1081 tttccagagc tcaaggattt ctggaccttt ctaccagttg tggaccatga gagggtggga 1141 gggcccaggg agggctttcg tactgctgaa tgttttccag agcatatatt acaatctttc 1201 aaagtcgcaa aaaaaaaaaa aaaaaaaaaa aa //