LOCUS BC019696 1286 bp mRNA linear HUM 21-OCT-2003
DEFINITION Homo sapiens dehydrogenase/reductase (SDR family) X-linked, mRNA
(cDNA clone IMAGE:4398682), partial cds.
ACCESSION BC019696
VERSION BC019696.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1286)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1286)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC019696.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759257.
FEATURES Location/Qualifiers
source 1..1286
/db_xref="H-InvDB:HIT000089951_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4398682"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1286
/gene="DHRSX"
/gene_synonym="CXorf11"
/gene_synonym="DHRS5X"
/gene_synonym="DHRSXY"
/db_xref="GeneID:207063"
CDS <1..995
/gene="DHRSX"
/gene_synonym="CXorf11"
/gene_synonym="DHRS5X"
/gene_synonym="DHRSXY"
/codon_start=3
/product="DHRSX protein"
/protein_id="AAH19696.2"
/db_xref="GeneID:207063"
/translation="ESPLSAARAALRVYAVGAAVILAQLLRRCRGGFLEPVFPPRPDR
VAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYCD
LASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTN
LLLDTLKESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSPHAAYAQSKLALVLF
TYHLQRLLAAEGSHVTANVVDPGVVNTDVYKHVFWATRLAKKLLGWLLFKTPDEGAWT
SIYAAVTPELEGVGGRYLYNKKETKSLHVTYNQKLQQQLWSKSCEMTGVLDVTL"
misc_feature 126..884
/gene="DHRSX"
/gene_synonym="CXorf11"
/gene_synonym="DHRS5X"
/gene_synonym="DHRSXY"
/note="adh_short; Region: short chain dehydrogenase. This
family contains a wide variety of dehydrogenases"
/db_xref="CDD:pfam00106"
BASE COUNT 317 a 353 c 332 g 284 t
ORIGIN
1 tcgagtcgcc attgtctgcg gcgcgggcgg ccctgcgggt ctacgcggta ggcgccgcgg
61 tgatcctggc gcagctgctg cggcgctgcc gcgggggctt cctggagcca gttttccccc
121 cacgacctga ccgtgtcgct atagtgacgg gagggacaga tggcattggc tattctacag
181 cgaagcatct ggcgagactt ggcatgcatg ttatcatagc tggaaataat gacagcaaag
241 ccaaacaagt tgtaagcaaa ataaaagaag aaaccttgaa cgacaaagtg gaatttttat
301 actgtgactt ggcttccatg acttccatcc ggcagtttgt gcagaagttc aagatgaaga
361 agattcctct ccatgtcctg atcaacaatg ctggggtgat gatggtccct cagaggaaaa
421 ccagagatgg attcgaagaa catttcggcc tgaactacct agggcacttc ctgctgacca
481 accttctctt ggatacgctg aaagagtctg ggtcccctgg ccacagtgcg agggtggtca
541 ccgtctcctc tgccacccat tacgtcgctg agctgaacat ggatgacctt cagagcagtg
601 cctgctactc accccacgca gcctacgccc agagcaagct ggcccttgtc ctgttcacct
661 accacctcca gcggctgctg gcggctgagg gaagccacgt gaccgccaac gtggtggacc
721 ccggggtggt caacacggac gtctacaagc acgtgttctg ggccacccgt ctggcgaaga
781 agcttctcgg ctggttgctt ttcaagaccc ccgatgaagg agcgtggact tccatctacg
841 cagcagtcac cccagagctg gaaggagttg gtggccgtta cctatacaac aagaaagaga
901 ccaagtccct ccacgtcacc tacaaccaga aactgcagca gcagctgtgg tctaagagtt
961 gtgagatgac tggggtcctt gatgtgaccc tgtgatatcc tgtctcagga tagctgctgc
1021 cccaagaaac acattgcacc tgccaatagc ttgtgggtct gtgaagactg cggtgtttga
1081 gtttctcaca cccacctgcc cacagggctc tgtcctctag ttttgagaca gctgcctcaa
1141 cctctgcaga acttcaagaa gccaaataaa cattttggag gataatcacc ccaagtggtc
1201 ttcaaccata aactttgtga ttccaaagtg cccagttgtc acaggtgcca taaataatta
1261 cattttccaa caaaaaaaaa aaaaaa
//