LOCUS BC019679 2480 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens phospholipase C, eta 2, mRNA (cDNA clone
IMAGE:4932488), partial cds.
ACCESSION BC019679
VERSION BC019679.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2480)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2480)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: n Column: 13.
FEATURES Location/Qualifiers
source 1..2480
/db_xref="H-InvDB:HIT000089948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4932488"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2480
/gene="PLCH2"
/gene_synonym="PLC-eta2"
/gene_synonym="PLCeta2"
/gene_synonym="RP3-395M20.1"
/db_xref="GeneID:9651"
/db_xref="HGNC:HGNC:29037"
CDS <1..2153
/gene="PLCH2"
/gene_synonym="PLC-eta2"
/gene_synonym="PLCeta2"
/gene_synonym="RP3-395M20.1"
/codon_start=3
/product="PLCH2 protein"
/protein_id="AAH19679.1"
/db_xref="GeneID:9651"
/db_xref="HGNC:HGNC:29037"
/translation="AGCQMVALNYQSEGRMLQLNRAKFSANGGCGYVLKPGCMCQGVF
NPNSEDPLPGQLKKQLVLRIISGQQLPKPRDSMLGDRGEIIDPFVEVEIIGLPVDCSR
EQTRVVDDNGFNPTWEETLVFMVHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSMMP
GYRHVYLEGMEEASIFVHVAVSDISGKVKQALGLKGLFLRGPKPGSLDSHAAGRPPAR
PSVSQRILRRTASAPTKSQKPGRRGFPELVLGTRDTGSKGVADDVVPPGPGPAPEAPA
QEGPGSGSPRDTRPLSTQRPLPPLCSLETIAEEPAPGPGPPPPAAVPTSSSQGRPPYP
TGPGANVASPLEDTEEPRDSRPRPCNGEGAGGAYERAPGSQTDGRSQPRTLGHLPVIR
RVKSEGQVPTEPLGGWRPLAAPFPAPAVYSDATGSDPLWQRLEPCGHRDSVSSSSSMS
SSDTVIDLSLPSLGLGRSRENLAGAHMGRLPPRPHSASAARPDLPPVTKSKSNPNLRA
TGQRPPIPDELQPRSLAPRMAGLPFRPPWGCLSLVGVQDCPVAAKSKSLGDLTADDFA
PSFEGGSRRLSHSLGLPGGTRRVSGPGVRRDTLTEQLRWLTVFQQAGDITSPTSLGPA
GEGVAGGPGFVRRSSSRSHSRVRAIASRARQAQERQQRLQGLGRQGPPEEERGTPEGA
CSVGHEGSVDAPAPSKGALGPASAAAENLVLLRL"
BASE COUNT 443 a 865 c 798 g 374 t
ORIGIN
1 acgccggctg ccaaatggtt gccctgaact accagtcaga ggggcggatg ctgcagctga
61 accgagccaa gttcagcgcc aacggtggct gcggctacgt actcaagcct gggtgcatgt
121 gccagggcgt gttcaacccc aactcggagg accccctgcc cgggcagctc aagaagcagc
181 tggtgctccg gatcatcagt ggccagcagc ttcccaagcc gcgcgactcc atgctggggg
241 accgtgggga gatcatcgac ccctttgtgg aggtggagat cattgggctc cctgtggact
301 gcagcaggga gcagacccgc gtggtggacg acaacgggtt caaccccacc tgggaggaga
361 ccctggtttt catggtgcac atgccggaga tcgcgctggt ccgcttcctc gtctgggacc
421 acgatcccat cgggcgtgac ttcattggcc agaggacgct ggccttcagc agcatgatgc
481 caggctacag acacgtgtac ctagaaggga tggaagaggc ctccatcttc gtgcatgtgg
541 ctgtcagtga catcagcggt aaggtcaagc aggctctggg cctaaaaggc ctcttcctcc
601 gaggcccaaa gcccggctcg ctggacagtc atgctgctgg gcggcccccg gcccggccct
661 ccgttagcca gcggatcctg cggcgcacgg ccagcgcccc gaccaagagc cagaagccgg
721 gccgcagggg cttcccggag ctggtcctgg gtacacggga cacaggctcc aagggggtgg
781 cagacgatgt ggtgcccccc gggcccggac ctgctccgga agccccagcc caggaggggc
841 ccggcagcgg cagcccccga gacacccgcc ccctctccac gcagcggcca ctccccccac
901 tgtgcagcct ggaaaccatc gctgaggagc ccgccccagg ccctggtccc ccgccaccag
961 cggctgtccc caccagctct tctcagggac ggcccccata ccccacagga cccggagcca
1021 atgtggcaag ccccctagag gacactgagg agccccgaga cagcaggcct cggccgtgca
1081 acggcgaggg cgccggcggg gcatacgaga gggcccccgg cagccagacg gacggcagga
1141 gccagccccg gaccctgggc cacctgcccg tgattagaag ggtgaagagt gaggggcagg
1201 tgcccacgga gcccctggga gggtggcggc ccctggccgc tccctttcca gctcctgccg
1261 tgtactccga tgccacgggc agtgacccgc tgtggcagcg gctggagcca tgtggccacc
1321 gagacagcgt ttcctcctcc tccagcatgt catccagcga cactgtcatt gacctctccc
1381 tgcccagcct gggcctgggc cgcagccgtg agaacctcgc tggagcccac atgggacgcc
1441 tgccccccag gccccactcg gcttcggctg cccgcccaga cctgccacct gtgaccaaga
1501 gcaaatccaa ccccaacctt cgggctacag gccagcggcc tcccatacct gacgaactgc
1561 agcccaggtc cctggcccca aggatggctg gcctcccctt ccggcctccc tggggctgcc
1621 tttccctggt gggcgtgcag gactgccccg tggctgccaa gtccaagagc ctgggcgacc
1681 tcactgctga tgactttgcc cctagctttg agggcggctc ccgcagactg agccacagcc
1741 tgggcctccc gggagggaca cggcgggtgt cggggccagg ggtgagacgg gacaccctga
1801 cagagcagct gcgctggctc actgtcttcc agcaggcagg agacatcacg tcacccacca
1861 gcctgggccc ggctggggag ggggtggcag ggggccctgg ttttgtgcgg cgctcctcct
1921 cccgcagcca cagccgcgtg cgtgccattg ccagccgggc ccgccaggcc caggagcggc
1981 agcagagact gcagggcctg ggccggcagg gacccccaga agaggagcgg ggcacccccg
2041 agggcgcctg ctccgtgggc cacgagggca gtgtggatgc accagcaccc tccaagggag
2101 ccctcgggcc agcatccgcg gctgctgaaa acctggtcct gctccgcctc tgaccgtcag
2161 tggtgggaac ctgggcggct ctggaggccc agggcagggg tgggcgtgtt gtttgctcag
2221 gaaacagggc agccaggccc ccaaaactgt gtccccctgg ctgccctgtg tcccctccgc
2281 ccctgcctcc ctcctgcccc tgctcccggg gaggaaaggc taaagctgct ggcccggggc
2341 ccacaggagg ggcttcgagg ctggccctgc caggcagttt tcccggcgtt ttaggatctg
2401 tacatagaga aatatttaaa tttttagaag caaaacttat acaacattaa aatgatacca
2461 agtccctaaa aaaaaaaaaa
//