LOCUS BC019669 2688 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens eukaryotic translation elongation factor 1 alpha 1,
mRNA (cDNA clone IMAGE:4478650), with apparent retained intron.
ACCESSION BC019669
VERSION BC019669.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2688)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2688)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: d Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2688
/db_xref="H-InvDB:HIT000050732"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4478650"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 643 a 619 c 736 g 690 t
ORIGIN
1 gtttgccgcc agaacacagg taagtgccgt gtgtggttcc cgcgggcctg gcctctttac
61 gggttatggc ccttgcgtgc cttgaattac ttccacgccc ctggctgcag tacgtgattc
121 ttgatcccga gcttcgggtt ggaagtgggt gggagagttc gaggccttgc gcttaaggag
181 ccccttcgcc tcgtgcttga gttgaggcct ggcctgggcg ctggggccgc cgcgtgcgaa
241 tctggtggca ccttcgcgcc tgtctcgctg ctttcgataa gtctctagcc atttaaaatt
301 tttgatgacc tgctgcgacg ctttttttct ggcaagatag tcttgtaaat gcgggccaag
361 atctgcacac tggtatttcg gtttttgggg ccgcgggcgg cgacggggcc cgtgcgtccc
421 agcgcacatg ttcggcgagg cggggcctgc gagcgcggcc accgagaatc ggacgggggt
481 agtctcaagc tggccggcct gctctggtgc ctggcctcgc gccgccgtgt atcgccccgc
541 cctgggcggc aaggctggcc cggtcggcac cagttgcgtg agcggaaaga tggccgcttc
601 ccggccctgc tgcagggagc tcaaaatgga ggacgcggcg ctcgggagag cgggcgggtg
661 agtcacccac acaaaggaaa agggcctttc cgtcctcagc cgtcgcttca tgtgactcca
721 cggagtaccg ggcgccgtcc aggcacctcg attagttctc gagcttttgg agtacgtcgt
781 ctttaggttg gggggagggg ttttatgcga tggagtttcc ccacactgag tgggtggaga
841 ctgaagttag gccagcttgg cacttgatgt aattctcctt ggaatttgcc ctttttgagt
901 ttggatcttg gttcattctc aagcctcaga cagtggttca aagttttttt cttccatttc
961 aggtgtcgtg aaaactaccc ctaaaagcca aaatgggaaa ggaaaagact catatcaaca
1021 ttgtcgtcat tggacacgta gattcgggca agtccaccac tactggccat ctgatctata
1081 aatgcggtgg catcgacaaa agaaccattg aaaaatttga gaaggaggct gctgagatgg
1141 gaaagggctc cttcaagtat gcctgggtct tggataaact gaaagctgag cgtgaacgtg
1201 gtatcaccat tgatatctcc ttgtggaaat ttgagaccag caagtactat gtgactatca
1261 ttgatgcccc aggacacaga gactttatca aaaacatgat tacagggaca tctcaggctg
1321 actgtgctgt cctgattgtt gctgctggtg ttggtgaatt tgaagctggt atctccaaga
1381 atgggcagac ccgagagcat gcccttctgg cttacacact gggtgtgaaa caactaattg
1441 tcggtgttaa caaaatggat tccactgagc caccctacag ccagaagaga tatgaggaaa
1501 ttgttaagga agtcagcact tacattaaga aaattggcta caaccccgac acagtagcat
1561 ttgtgccaat ttctggttgg aatggtgaca acatgctgga gccaagtgct aacatgcctt
1621 ggttcaaggg atggaaagtc acccgtaagg atggcaatgc cagtggaacc acgctgcttg
1681 aggctctgga ctgcatccta ccaccaactc gtccaactga caagcccttg cgcctgcctc
1741 tccaggatgt ctacaaaatt ggtggtattg gtactgttcc tgttggccga gtggagactg
1801 gtgttctcaa acccggtatg gtggtcacct ttgctccagt caacgttaca acggaagtaa
1861 aatctgtcga aatgcaccat gaagctttga gtgaagctct tcctggggac aatgtgggct
1921 tcaatgtcaa gaatgtgtct gtcaaggatg ttcgtcgtgg caacgttgct ggtgacagca
1981 aaaatgaccc accaatggaa gcagctggct tcactgctca ggtgattatc ctgaaccatc
2041 caggccaaat aagcgccggc tatgcccctg tattggattg ccacacggct cacattgcat
2101 gcaagtttgc tgagctgaag gaaaagattg atcgccgttc tggtaaaaag ctggaagatg
2161 gccctaaatt cttgaagtct ggtgatgctg ccattgttga tatggttcct ggcaagccca
2221 tgtgtgttga gagcttctca gactatccac ctttgggtcg ctttgctgtt cgtgatatga
2281 gacagacagt tgcggtgggt gtcatcaaag cagtggacaa gaaggctgct ggagctggca
2341 aggtcaccaa gtctgcccag aaagctcaga aggctaaatg aatattatcc ctaatacctg
2401 ccaccccact cttaatcagt ggtggaagaa cggtctcaga actgtttgtt tcaattggcc
2461 atttaagttt agtagtaaaa gactggttaa tgataacaat gcatcgtaaa accttcagaa
2521 ggaaaggaga atgttttgtg gaccactttg gttttctttt ttgcgtgtgg cagttttaag
2581 ttattagttt ttaaaatcag tactttttaa tggaaacaac ttgaccaaaa atttgtcaca
2641 gaattttgag acccattaaa aaagttaaat gagaaaaaaa aaaaaaaa
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