LOCUS       BC019655                1348 bp    mRNA    linear   HUM 06-OCT-2003
DEFINITION  Homo sapiens sorting nexin 22, mRNA (cDNA clone MGC:24844
            IMAGE:4932954), complete cds.
ACCESSION   BC019655
VERSION     BC019655.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1348)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 29 Row: n Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 13376169.
FEATURES             Location/Qualifiers
     source          1..1348
                     /db_xref="H-InvDB:HIT000038677"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:24844 IMAGE:4932954"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1348
                     /gene="SNX22"
                     /gene_synonym="FLJ13952"
                     /db_xref="GeneID:79856"
     CDS             38..400
                     /gene="SNX22"
                     /gene_synonym="FLJ13952"
                     /codon_start=1
                     /product="SNX22 protein"
                     /protein_id="AAH19655.1"
                     /db_xref="GeneID:79856"
                     /translation="MLEVHIPSVGPEAEGPRQSPEKSHMVFRVEVLCSGRRHTVPRRY
                     SEFHALHKRIKKLYKVPDFPSKRLPNWRTRGLEQRRQGLEAYIQGILYLNQEVPKELL
                     EFLRLRHFPTDPKASNWG"
     misc_feature    80..352
                     /gene="SNX22"
                     /gene_synonym="FLJ13952"
                     /note="PX; Region: PX domain. PX domains bind to
                     phosphoinositides"
                     /db_xref="CDD:pfam00787"
BASE COUNT          338 a          356 c          409 g          245 t
ORIGIN      
        1 gagccgagcg cgcggagcag ctggggccgg ggcgcggatg ctggaagttc acatcccgtc
       61 ggtggggccc gaggccgagg ggcccaggca gagcccggag aaaagccaca tggtgttccg
      121 agtggaggtg ctgtgcagcg ggcgcagaca cacggtgcca aggcgctaca gcgagttcca
      181 cgcgctgcac aagcggatca agaagctgta caaagtgccc gacttcccct cgaaacgcct
      241 gcccaactgg aggaccagag ggttggaaca gcgccggcag ggcttggagg cttacatcca
      301 gggcatcctg tacctgaacc aggaggtgcc caaggagtta ctggaattcc tgagacttcg
      361 gcacttcccc acagacccca aggctagcaa ctgggggtaa ggggggccga tggcgggggc
      421 caggggctgt cagcagtgag cagcaccctg agggagttcc tgcctggcga cagcagctcc
      481 cagcagcacc agcggcctgt cctgagcttc catgtggatc cctatgtttg caacccctcc
      541 ccagagtcgc tgcccaacgt ggtggtgaat ggtgtgctcc agggcctcta cagcttcagc
      601 atcagcccag ataaagccca gccaaaggcg gcctgtcacc ctgctcctct gccaccgatg
      661 ccctgatcag tccagaggcc tttggctgcc tcctaagaaa gtcatgtgcc tctgtcctat
      721 gaactccata taaggctggg tcctcctttg gcctggaccc aggacttaat tacccagtgc
      781 ccagttgtgc cacattccca ctcaaggctc agaacttggc tcgcattggt agctggaggt
      841 ggtagaattt gtatgctctt agagcccaac agccaaggca gggtcaagaa gataagtaat
      901 aaaagaggaa gtcagctggg tgcagaggct catgcctgta atcccaatac tttaggaggc
      961 caaggcagga ggatgcttgg gtctggaagt ttgagaccag ccagcgcaac atagtgagac
     1021 ctgtctctac caaaaaaaaa aaaaaaatca atttagaggt aggctatgaa aaagtacaga
     1081 tacatccctt aacatagact ggagggtggt ggcaagggga gcaaatgtgg aggcccagta
     1141 gctggcaaag tttagaagca gggggcaaaa gctcctgcct gacttttcct gggtagctcc
     1201 tgggtcaaaa tttcaggcag gatcccaggg aaggggcagg cacccattgc cacaggagag
     1261 ttgcaggcat gttgggatgt aggcctaggg gaggtgctgc aggctcaaga accaggccca
     1321 cacattatat attaaaaaaa aaaaaaaa
//