LOCUS BC019306 1130 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GIY-YIG domain containing 2, mRNA (cDNA clone MGC:4202
IMAGE:2823474), complete cds.
ACCESSION BC019306
VERSION BC019306.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1130)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1130)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089944.
FEATURES Location/Qualifiers
source 1..1130
/db_xref="H-InvDB:HIT000038625_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4202 IMAGE:2823474"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1130
/gene="GIYD2"
/gene_synonym="FLJ23439"
/gene_synonym="MGC2532"
/gene_synonym="MGC5178"
/db_xref="GeneID:79008"
/db_xref="HGNC:HGNC:28748"
CDS 190..1017
/gene="GIYD2"
/gene_synonym="FLJ23439"
/gene_synonym="MGC2532"
/gene_synonym="MGC5178"
/codon_start=1
/product="GIY-YIG domain containing 2"
/protein_id="AAH19306.1"
/db_xref="GeneID:79008"
/db_xref="HGNC:HGNC:28748"
/translation="MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQ
HNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLR
GETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQDLCLPPPPHVPLAFGPPPPQA
PAPRRRAGPFDDAEPEPDQGDPGACCSLCAQTIQDEEGPLCCPHPGCLLRAHVICLAE
EFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET"
BASE COUNT 199 a 389 c 339 g 203 t
ORIGIN
1 cttctacacc cgcctccaga caggagaggg gcacgtaccg gcgctacggc ttcctgcagg
61 ctgcctccgg atagtccccg agagcttgtt ccgaagcaag caccctgcag ccctagcgat
121 ccagccctcc cctggaccct aggtcacggc aatcaacccc ctgctgtggt tcccgaaccc
181 caaggcccga tgggtcccgc gggggtcgcg gcgaggccag ggcgcttttt cggcgtctac
241 ctgctctact gcctgaaccc ccggtaccgg ggccgcgtct acgtggggtt cactgtcaac
301 actgctcgtc gggtccagca gcacaatggg ggccgcaaaa aaggcggggc ctggcggacc
361 agcgggcgag ggccctggga gatggtgctc gtcgtgcacg gcttcccgtc ctccgtggcc
421 gcccttcggt ttgagtgggc ttggcagcac ccgcacgcct cgcgccgcct ggcgcacgtg
481 gggcctcgcc tgcgaggaga gacagccttc gctttccacc tgcgcgtgct ggcgcacatg
541 ctgcgcgcac cgccctgggc tcgcctcccg ctcacgctgc gctgggtgcg cccagacctc
601 cgccaggacc tctgcctccc gccgccgccg cacgtgcctc tggccttcgg gcctccaccg
661 ccccaggccc cggccccaag gcgccgcgca ggtccctttg atgacgcgga gcctgagcca
721 gaccaggggg atccaggggc ctgctgctcc ctgtgcgccc agaccatcca ggatgaagag
781 gggcccttgt gttgccccca ccctggctgc ctgctaaggg cccatgtgat ctgcctggca
841 gaggagtttc ttcaggaaga accagggcag cttctgcccc tagagggcca atgcccttgc
901 tgtgagaagt cactgctttg gggagacctg atctggctgt gccagatgga cactgagaaa
961 gaagtagaag actcagaatt agaagaggca cactggacag acctgctgga gacctgatcc
1021 tcagtgtcct taccccctcc tacctctttt ctgtgccacc tgctgtgggt ccagcaggtt
1081 tttacttgag tacaataaaa agtctgagtc aaaaaaaaaa aaaaaaaaaa
//