LOCUS BC019297 1554 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Yip1 domain family, member 3, mRNA (cDNA clone
MGC:4111 IMAGE:2905449), complete cds.
ACCESSION BC019297
VERSION BC019297.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1554)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1554)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49472827.
FEATURES Location/Qualifiers
source 1..1554
/db_xref="H-InvDB:HIT000038617"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4111 IMAGE:2905449"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1554
/gene="YIPF3"
/gene_synonym="dJ337H4.3"
/gene_synonym="DKFZP566C243"
/gene_synonym="FinGER3"
/gene_synonym="KLIP1"
/gene_synonym="RP3-337H4.3"
/db_xref="GeneID:25844"
/db_xref="HGNC:HGNC:21023"
/db_xref="MIM:609775"
CDS 133..1185
/gene="YIPF3"
/gene_synonym="dJ337H4.3"
/gene_synonym="DKFZP566C243"
/gene_synonym="FinGER3"
/gene_synonym="KLIP1"
/gene_synonym="RP3-337H4.3"
/codon_start=1
/product="Yip1 domain family, member 3"
/protein_id="AAH19297.1"
/db_xref="GeneID:25844"
/db_xref="HGNC:HGNC:21023"
/db_xref="MIM:609775"
/translation="MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSG
SSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGK
RQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLV
FTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQM
LALLGYGLFGHCIVLFITYNIHLHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLL
LCGTLAALHMLFLLYLHFAYHKVVEGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTT
VLNATAKAVAVTLQSH"
BASE COUNT 346 a 452 c 406 g 350 t
ORIGIN
1 gcttctcctt tttgtgttcc ggccgatccc acctctcctc gaccctggac gtctaccttc
61 cggaggccca catcttgccc actccgcgcg cggggctagc gcgggtttca gcgacgggag
121 ccctcaaggg acatggcaac tacagcggcg ccggcgggcg gcgcccgaaa tggagctggc
181 ccggaatggg gagggttcga agaaaacatc cagggcggag gctcagctgt gattgacatg
241 gagaacatgg atgatacctc aggctctagc ttcgaggata tgggtgagct gcatcagcgc
301 ctgcgcgagg aagaagtaga cgctgatgca gctgatgcag ctgctgctga agaggaggat
361 ggagagttcc tgggcatgaa gggctttaag ggacagctga gccggcaggt ggcagatcag
421 atgtggcagg ctgggaaaag acaagcctcc agggccttca gcttgtacgc caacatcgac
481 atcctcagac cctactttga tgtggagcct gctcaggtgc gaagcaggct cctggagtcc
541 atgatcccta tcaagatggt caacttcccc cagaaaattg caggtgaact ctatggacct
601 ctcatgctgg tcttcactct ggttgctatc ctactccatg ggatgaagac gtctgacact
661 attatccggg agggcaccct gatgggcaca gccattggca cctgcttcgg ctactggctg
721 ggagtctcat ccttcattta cttccttgcc tacctgtgca acgcccagat caccatgctg
781 cagatgttgg cactgctggg ctatggcctc tttgggcatt gcattgtcct gttcatcacc
841 tataatatcc acctccacgc cctcttctac ctcttctggc tgttggtggg tggactgtcc
901 acactgcgca tggtagcagt gttggtgtct cggaccgtgg gccccacaca gcggctgctc
961 ctctgtggca ccctggctgc cctacacatg ctcttcctgc tctatctgca ttttgcctac
1021 cacaaagtgg tagaggggat cctggacaca ctggagggcc ccaacatccc gcccatccag
1081 agggtcccca gagacatccc tgccatgctc cctgctgctc ggcttcccac caccgtcctc
1141 aacgccacag ccaaagctgt tgcggtgacc ctgcagtcac actgacccca cctgaaattc
1201 ttggccagtc ctctttcccg cagctgcaga gaggaggaag actattaaag gacagtcctg
1261 atgacatgtt tcgtagatgg ggtttgcagc tgccactgag ctgtagctgc gtaagtacct
1321 ccttgatgcc tgtcggcact tctgaaaggc acaaggccaa gaactcctgg ccaggactgc
1381 aaggctctgc agccaatgca gaaaatgggt cagctccttt gagaacccct ccccacctac
1441 cccttccttc ctctttatct ctcccacatt gtcttgctaa atatagactt ggtaattaaa
1501 atgttgattg aagtctggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//