LOCUS BC019277 1009 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens jumping translocation breakpoint, mRNA (cDNA clone MGC:3777 IMAGE:2823348), complete cds. ACCESSION BC019277 VERSION BC019277.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1009) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1009) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: a Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38455406. FEATURES Location/Qualifiers source 1..1009 /db_xref="H-InvDB:HIT000038600" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3777 IMAGE:2823348" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1009 /gene="JTB" /gene_synonym="B PAR" /gene_synonym="hJT" /gene_synonym="HJTB" /gene_synonym="HSPC222" /gene_synonym="PAR" /db_xref="GeneID:10899" /db_xref="HGNC:HGNC:6201" /db_xref="MIM:604671" CDS 367..807 /gene="JTB" /gene_synonym="B PAR" /gene_synonym="hJT" /gene_synonym="HJTB" /gene_synonym="HSPC222" /gene_synonym="PAR" /codon_start=1 /product="jumping translocation breakpoint" /protein_id="AAH19277.1" /db_xref="GeneID:10899" /db_xref="HGNC:HGNC:6201" /db_xref="MIM:604671" /translation="MLAGAGRPGLPQGRHLCWLLCAFTLKLCQAEAPVQEEKLSASTS NLPCWLVEEFVVAEECSPCSNFRAKTTPECGPTGYVEKITCSSSKRNEFKSCRSALME QRLFWKFEGAVVCVALIFACLVIIRQRQLDRKALEKVRKQIESI" BASE COUNT 236 a 276 c 275 g 222 t ORIGIN 1 ccgggccccg agctcggtcc cgcgcccgag gatcctccac ggggctagat ggctgcgtcg 61 ggggcgggag cggaggtgag cgggcgctag ggccgcgagc ccccgccggc ccttcctcca 121 gcgccctgcg gaccccgcag aaggcgctcg cctccctagc ccgcaaaaac atatcgattt 181 ttctcgctgt ggcaacgggg acgtcctgat agatcctctg ctccaatagg caactccggc 241 cttccctgcc ctgacctgga acctctggga gggctgcaga gtaagtgccg cctctgcgct 301 ccgacggagg cacgaggcct gtggagtagg tccctctgtt ccgacaggtg cgacacttgg 361 cgctccatgc ttgcgggtgc cgggaggcct ggcctccccc agggccgcca cctctgctgg 421 ttgctctgtg ctttcacctt aaagctctgc caagcagagg ctcccgtgca ggaagagaag 481 ctgtcagcaa gcacctcaaa tttgccatgc tggctggtgg aagagtttgt ggtagcagaa 541 gagtgctctc catgctctaa tttccgggct aaaactaccc ctgagtgtgg tcccacagga 601 tatgtagaga aaatcacatg cagctcatct aagagaaatg agttcaaaag ctgccgctca 661 gctttgatgg aacaacgctt attttggaag ttcgaagggg ctgtcgtgtg tgtggccctg 721 atcttcgctt gtcttgtcat cattcgtcag cgacaattgg acagaaaggc tctggaaaag 781 gtccggaagc aaatcgagtc catatagcta cattccaccc ttgtatcctg ggtcttagag 841 accctatctc agacagtgaa agtgaaatgg actgatttgc actcttggtt ctttggagcc 901 ttgtggtgga atcccctttt ccccatcttc ttctttcaga tcattaatga gcagaataaa 961 aagagtaaaa tggtaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //