LOCUS BC019249 1245 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens lactate dehydrogenase C, mRNA (cDNA clone MGC:26530
IMAGE:4839028), complete cds.
ACCESSION BC019249
VERSION BC019249.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1245)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1245)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC019249.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: p Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9257229.
FEATURES Location/Qualifiers
source 1..1245
/db_xref="H-InvDB:HIT000038575"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26530 IMAGE:4839028"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1245
/gene="LDHC"
/gene_synonym="LDH3"
/gene_synonym="LDHX"
/db_xref="GeneID:3948"
/db_xref="HGNC:HGNC:6544"
/db_xref="MIM:150150"
CDS 120..1118
/gene="LDHC"
/gene_synonym="LDH3"
/gene_synonym="LDHX"
/codon_start=1
/product="lactate dehydrogenase C"
/protein_id="AAH19249.3"
/db_xref="GeneID:3948"
/db_xref="HGNC:HGNC:6544"
/db_xref="MIM:150150"
/translation="MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDL
ADELALVDVALDKLKGEMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQE
GETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIG
SGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKL
GTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTM
VKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEALFKKSAETLWNIQKDLIF"
BASE COUNT 363 a 207 c 290 g 385 t
ORIGIN
1 gcctcaactg tcgttggtgt atttttctgg tgtcacttct gtgccttcct tcaaaggtgg
61 tgctttgtcc ctgtgggtca tctgtactga ttgcgccaag caaagcattt gttctccaaa
121 tgtcaactgt caaggagcag ctaattgaga agctaattga ggatgatgaa aactcccagt
181 gtaaaattac tattgttgga actggtgccg taggcatggc ttgtgctatt agtatcttac
241 tgaaggattt ggctgatgaa cttgcccttg ttgatgttgc attggacaaa ctgaagggag
301 aaatgatgga tcttcagcat ggcagtcttt tctttagtac ttcaaagatt acttctggaa
361 aagattacag tgtatctgca aactccagaa tagttattgt cacagcaggt gcaaggcagc
421 aggagggaga aactcgcctt gccctggtcc aacgtaatgt ggctataatg aaatcaatca
481 ttcctgccat agtccattat agtcctgatt gtaaaattct tgttgtttca aatccagtgg
541 atattttgac atatatagtc tggaagataa gtggcttacc tgtaactcgt gtaattggaa
601 gtggttgtaa tctagactct gcccgtttcc gttacctaat tggagaaaag ttgggtgtcc
661 accccacaag ctgccatggt tggattattg gagaacatgg tgattctagt gtgcccttat
721 ggagtggggt gaatgttgct ggtgttgctc tgaagactct ggaccctaaa ttaggaacgg
781 attcagataa ggaacactgg aaaaatatcc ataaacaagt tattcaaagt gcctatgaaa
841 ttatcaagct gaaggggtat acctcttggg ctattggact gtctgtgatg gatctggtag
901 gatccatttt gaaaaatctt aggagagtgc acccagtttc caccatggtt aagggattat
961 atggaataaa agaagaactc tttctcagta tcccttgtgt cttggggcgg aatggtgtct
1021 cagatgttgt gaaaattaac ttgaattctg aggaggaggc ccttttcaag aagagtgcag
1081 aaacactttg gaatattcaa aaggatctaa tattttaaat taaagccttc taatgttcca
1141 ctgtttggag aacagaagat agcaggctgt gtattttaaa ttttgaaagt attttcattt
1201 gatctttaaa aaataaaaac aaattggaga aaaaaaaaaa aaaaa
//