LOCUS BC019246 1867 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 38, member 5, mRNA (cDNA clone
MGC:2498 IMAGE:3506044), complete cds.
ACCESSION BC019246
VERSION BC019246.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1867)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1867)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC019246.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: p Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15723369.
FEATURES Location/Qualifiers
source 1..1867
/db_xref="H-InvDB:HIT000038572"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2498 IMAGE:3506044"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1867
/gene="SLC38A5"
/gene_synonym="JM24"
/gene_synonym="pp7194"
/gene_synonym="SN2"
/db_xref="GeneID:92745"
/db_xref="HGNC:HGNC:18070"
CDS 29..1447
/gene="SLC38A5"
/gene_synonym="JM24"
/gene_synonym="pp7194"
/gene_synonym="SN2"
/codon_start=1
/product="solute carrier family 38, member 5"
/protein_id="AAH19246.1"
/db_xref="GeneID:92745"
/db_xref="HGNC:HGNC:18070"
/translation="MELQDPKMNGALPSDAVGYRQEREGFLPSRGPAPGSKPVQFMDF
EGKTSFGMSVFNLSNAIMGSGILGLAYAMAHTGVIFFLALLLCIALLSSYSIHLLLTC
AGIAGIRAYEQLGQRAFGPAGKVVVATVICLHNVGAMSSYLFIIKSELPLVIGTFLYM
DPEGDWFLKGNLLIIIVSVLIILPLALMKHLGYLGYTSGLSLTCMLFFLVSVIYKKFQ
LGCAIGHNETAMESEALVGLPSQGLNSSCEAQMFTVDSQMSYTVPIMAFAFVCHPEVL
PIYTELCRPSKRRMQAVANVSIGAMFCMYGLTATFGYLTFYSSVKAEMLHMYSQKDPL
ILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPGKAFSWPRHVAIALILLVLVNVLVI
CVPTIRDIFGVIGSTSAPSLIFILPSIFYLRIVPSEVEPFLSWPKIQALCFGVLGVLF
MAVSLGFMFANWATGQSRMSGH"
BASE COUNT 377 a 541 c 521 g 428 t
ORIGIN
1 ggccacttca ggagctgaga ggagcaggat ggaactgcag gatccaaaga tgaatggagc
61 cctcccttcg gatgctgtgg gctacaggca agaacgtgag ggcttcctgc ccagtcgtgg
121 tcctgctcct gggagcaagc cggtccagtt catggatttc gaggggaaga catcgtttgg
181 aatgtcagtg ttcaacctca gcaacgccat catgggcagc ggcatcctgg ggctggccta
241 tgccatggcc cacacggggg tcatcttctt cctggccctg ctgctgtgca ttgcgcttct
301 gtcgtcctac tccatccacc tcctgctgac ctgtgctggt attgcaggca tccgagccta
361 tgagcagctg ggacagaggg cattcgggcc tgcggggaag gtagtggtgg ccacagtcat
421 ctgtctgcac aatgttgggg ccatgtccag ttacctgttc atcatcaaat ctgagctccc
481 cctggttatc ggcaccttcc tgtacatgga ccccgagggg gactggttct tgaagggaaa
541 cctcctcatc atcatcgtca gtgtgttaat catcctgccc ctcgccctca tgaaacactt
601 gggctacctg gggtacacca gtggtctctc tctgacctgc atgctgtttt tccttgtttc
661 ggtcatctac aagaagttcc aacttggctg tgctataggc cacaatgaaa cagcaatgga
721 gagtgaagct ctcgtgggac tccccagcca aggactcaac agcagctgtg aggcccagat
781 gttcacagtt gactcacaga tgtcctacac agtgcccatt atggcttttg cttttgtctg
841 ccaccctgag gtgctgccca tctatacgga gctctgccgg ccctccaagc gcaggatgca
901 ggccgtggcc aacgtgtcca ttggggccat gttctgcatg tatgggctca cagcaacctt
961 tggatacctc accttctaca gcagtgtgaa ggcggagatg ctgcacatgt acagccagaa
1021 ggacccgctc atcctctgtg tgcgcctggc cgtgctgctc gcggtgaccc tcactgtgcc
1081 agtcgtgctg ttccctatcc gccgggccct gcagcagctg cttttcccag gcaaggcctt
1141 cagctggcca cgacatgtgg ccatagctct gatcctgctt gttttggtca atgtccttgt
1201 catctgtgtg ccaaccatcc gggatatctt tggagttatc gggtccacct cagcccccag
1261 cctcatcttc atcctcccca gcatcttcta cctccgcatt gtaccctctg aggtggagcc
1321 tttcttatcc tggcccaaga tccaggccct gtgctttgga gtcctgggag tcctcttcat
1381 ggccgtcagt ctaggcttta tgtttgccaa ctgggccaca ggccagagcc gcatgtctgg
1441 acactgatca ggccctgctg gcccaggtcc ctgtgcgcat gcacatggag gggtcagggc
1501 cgctccctag ggtccctcct gcccaacatg tggaggtggc tggttcccat gaacgtggtt
1561 gtcagaggcg ggggacagca gaggctgcag actggcccac ttccctcctc cccagggatg
1621 ccaagcttgg atcatggccc taatcccaac cccaacccca tgggaggagg aggaggagga
1681 agaagaggag gaggaggagg aggaggagga ggaggaggag gaggccaggt cctggtggag
1741 cctttgccca gcccagtcct ctctgcctcc tcctggctga agctgtttgt caggattacc
1801 ctcgggctaa agaggaaaaa taaagatgtt gagctaccaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaa
//