LOCUS BC019096 1486 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens coiled-coil domain containing 94,
mRNA (cDNA clone MGC:29664 IMAGE:5014803), complete cds.
ACCESSION BC019096
VERSION BC019096.2
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 1486)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1486)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC019096.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: l Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1486
/db_xref="H-InvDB:HIT000038548"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Lung, small cell
carcinoma"
/db_xref="taxon:32630"
/clone="MGC:29664 IMAGE:5014803"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1486
/gene="CCDC94"
/gene_synonym="FLJ10374"
/db_xref="GeneID:55702"
/db_xref="HGNC:HGNC:25518"
CDS 79..1050
/gene="CCDC94"
/gene_synonym="FLJ10374"
/codon_start=1
/transl_table=11
/product="coiled-coil domain containing 94"
/protein_id="AAH19096.1"
/db_xref="GeneID:55702"
/db_xref="HGNC:HGNC:25518"
/translation="MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCK
TCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEH
GATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDL
NQRQAHVDFEAMLRQHRLSEEERRRQQQEEDEQETAALLEEARKRRLLEDSDSEDEAA
PSPLQPALRPNPTAILDEAPKPKRKVEVWEQSVGSLGSRPPLSRLVVVKKAKADPDCS
NGQPQAAPTPGAPQNRKEANPTPLTPGASSLSQLGAYLDSDDSNGSN"
BASE COUNT 397 a 428 c 437 g 224 t
ORIGIN
1 agagagagaa agagaactag tctcgagttt tttttttttt tttttctcag gtgcttgcga
61 ggtgatcaga aggcaaagat gtcggagcga aaagtattaa acaaatacta cccgccggac
121 tttgacccat caaagatccc caaactcaag ctccccaaag accggcagta cgtggtgcgg
181 ctgatggccc ccttcaacat gaggtgtaag acgtgcggag aatacatcta caaggggaag
241 aaattcaatg ctcggaagga gacggtgcag aacgaggtct acctgggcct gcccatcttc
301 cgcttttaca tcaagtgcac gcgctgcctg gcagagatca ccttcaagac agaccctgaa
361 aacacagact acaccatgga gcatggagcc acgcggaatt tccaggctga gaagctcctg
421 gaggaggagg agaagagggt gcagaaggag cgggaggacg aggagctgaa caaccccatg
481 aaggtgctgg agaaccggac caaggactcc aagctggaga tggaggtgct ggagaacctc
541 caggagctga aagacctgaa ccagcggcag gcgcacgtgg acttcgaggc tatgctgagg
601 cagcaccgcc tgtcggagga ggagcggcgg aggcagcagc aggaggagga cgagcaggag
661 accgcggccc tgttggagga agccagaaag cgaagactgc tggaggactc cgactcagag
721 gatgaggctg ctccctcgcc cctgcagcca gcccttcggc ccaaccccac cgccatcctg
781 gatgaggccc caaagcccaa gaggaaggtg gaggtctggg agcagagcgt tggcagcctg
841 ggcagccggc ccccgctgtc gaggctggtc gtggtgaaga aggcaaaggc cgacccggac
901 tgcagcaacg ggcagcctca ggcggccccc accccaggag ccccgcagaa caggaaggag
961 gccaacccta cacccctgac gcctggcgcg tcctccctga gccaactggg tgcatacctg
1021 gacagtgacg acagcaacgg cagcaactga gccctcccag gaccccctca cggggtcaaa
1081 gtcacacgtc cagcttcagc cacattgagg ccagcattgc tggtggtcag ggcaggaggc
1141 cttggcgtga ctggaggccg gacagacaag cgccagcgtg ctccaacaca tagggccacc
1201 aggggcctca gccccaggag gtcccttctc tgtgccctca ccagcctctc aacacctcgg
1261 ggacccctgc tgctcctgcc cccacctgtc actgtgctta gggctgcaac atccctggag
1321 cagcttccaa cactacttca gggtggcagt gtttggggca ctgggcgagc ctgccggcct
1381 ctagatggcc tcatctcttc cttccacaaa ctgtctagaa ccaataaaag gaaacctgcc
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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