LOCUS BC019059 1956 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SP110 nuclear body protein, mRNA (cDNA clone MGC:29475
IMAGE:5088115), complete cds.
ACCESSION BC019059
VERSION BC019059.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1956)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1956)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC019059.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17986255.
FEATURES Location/Qualifiers
source 1..1956
/db_xref="H-InvDB:HIT000038525"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29475 IMAGE:5088115"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1956
/gene="SP110"
/gene_synonym="FLJ22835"
/gene_synonym="VODI"
/db_xref="GeneID:3431"
/db_xref="HGNC:HGNC:5401"
/db_xref="MIM:604457"
CDS 102..1745
/gene="SP110"
/gene_synonym="FLJ22835"
/gene_synonym="VODI"
/codon_start=1
/product="SP110 nuclear body protein"
/protein_id="AAH19059.1"
/db_xref="GeneID:3431"
/db_xref="HGNC:HGNC:5401"
/db_xref="MIM:604457"
/translation="MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIIT
KRMYMESLEACRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRS
FKRVGASYERQSRDTPILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPG
TSSQQSDEILSESPSPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLT
STVQVASDNLIPQIRDKEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKK
GKKRKRCIWSTPKRRHKKKSLPRALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQ
KARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDK
VTQRKDDSTWNSEVMMRVQKARTKCARKSRSKEKKKEKDICSSSKRRFQKNIHRRGKP
KSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRN
AKNWKRNIRCEGMTLGELLKSGLLLCPPRINLKRELNSK"
BASE COUNT 656 a 468 c 440 g 392 t
ORIGIN
1 gttttgcctg ctagcatctc cctgtaactc tcccaatctt gaggagtgat ccctgtccca
61 gcccctggaa aggggcagga acgacaaact caaagtccag gatgttcacc atgacaagag
121 ccatggaaga ggctcttttt cagcacttca tgcaccagaa gctggggatc gcctatgcca
181 tacacaagcc atttcccttc tttgaaggcc tcctagacaa ctccatcatc actaagagaa
241 tgtacatgga atctctggaa gcctgtagaa atttgatccc tgtatccaga gtggtgcaca
301 acattctcac ccaactggag aggactttta acctgtctct tctggtgaca ttgttcagtc
361 aaattaacct gcgtgaatat cccaatctgg tgacgattta cagaagcttc aaacgtgttg
421 gtgcttccta tgaacggcag agcagagaca caccaatcct acttgaagcc ccaactggcc
481 tagcagaagg aagctccctc cataccccac tggcgctgcc cccaccacaa ccccctcaac
541 caagctgttc accctgtgcg ccaagagtca gtgagcctgg aacatcctcc cagcaaagcg
601 atgagatcct gagtgagtcg cccagcccat ctgaccctgt cctgcctctc cctgcactca
661 tccaggaagg aagaagcact tcagtgacca atgacaagtt aacatccaaa atgaatgcgg
721 aagaagactc agaagagatg cccagcctcc tcactagcac tgtgcaagtg gccagtgaca
781 acctgatccc ccaaataaga gataaagaag accctcaaga gatgccccac tctcccttgg
841 gctctatgcc agagataaga gataattctc cagaaccaaa tgacccagaa gagccccagg
901 aggtgtccag cacaccttca gacaagaaag gaaagaaaag aaaaagatgt atctggtcaa
961 ctccaaaaag gagacataag aaaaaaagcc tcccaagagc cttatctaga cacggaatcc
1021 aaaagaagct caaaagggtg gatcaggttc ctcaaaagaa agatgactca acttgtaact
1081 ccacggtaga gacaagggcc caaaaggcga gaactgaatg tgcccgaaag tcgagatcag
1141 aggagatcat tgatggcact tcagaaatga atgaaggaaa gaggtcccag aagacgccta
1201 gtacaccacg aagggtcaca caaggggcag cctcacctgg gcatggcatc caagagaagc
1261 tccaagtggt ggataaggtg actcaaagga aagacgactc aacctggaac tcagaggtca
1321 tgatgagggt ccaaaaggca agaactaaat gtgcccgaaa gtccagatcg aaagaaaaga
1381 aaaaggagaa agatatctgt tcaagctcaa aaaggagatt tcagaaaaat attcaccgaa
1441 gaggaaaacc caaaagtgac actgtggatt ttcactgttc taagctcccc gtgacctgtg
1501 gtgaggcgaa agggatttta tataagaaga aaatgaaaca cggatcctca gtgaagtgca
1561 ttcggaatga ggatggaact tggttaacac caaatgaatt tgaagtcgaa ggaaaaggaa
1621 ggaacgcaaa gaactggaaa cggaatatac gttgtgaagg aatgacccta ggagagctgc
1681 tgaagagtgg acttttgctc tgtcctccaa gaataaatct caagagagag ttaaatagca
1741 agtgaatttc tactaccctc tcagtcacca tgttgcagac tttccctgtc tggaggctca
1801 ccttagagct tctgagtttc caagctctga gtcacctcca catttgggca tggcatcttc
1861 aaaacaatta atttgcatag ttaatttggg atggggaagc aaatgactct aaaataaaaa
1921 ttaaatgaaa aagctcaaaa aaaaaaaaaa aaaaaa
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