LOCUS       BC018999                1759 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens sphingomyelin phosphodiesterase, acid-like 3A, mRNA
            (cDNA clone MGC:20681 IMAGE:3138813), complete cds.
ACCESSION   BC018999
VERSION     BC018999.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1759)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC018999.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 30 Row: a Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 34147321.
FEATURES             Location/Qualifiers
     source          1..1759
                     /db_xref="H-InvDB:HIT000038503"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:20681 IMAGE:3138813"
                     /tissue_type="Placenta, choriocarcinoma"
                     /clone_lib="NIH_MGC_21"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1759
                     /gene="SMPDL3A"
                     /gene_synonym="ASM3A"
                     /gene_synonym="ASML3a"
                     /gene_synonym="FLJ20177"
                     /gene_synonym="yR36GH4.1"
                     /db_xref="GeneID:10924"
                     /db_xref="HGNC:HGNC:17389"
     CDS             69..1430
                     /gene="SMPDL3A"
                     /gene_synonym="ASM3A"
                     /gene_synonym="ASML3a"
                     /gene_synonym="FLJ20177"
                     /gene_synonym="yR36GH4.1"
                     /codon_start=1
                     /product="sphingomyelin phosphodiesterase, acid-like 3A"
                     /protein_id="AAH18999.1"
                     /db_xref="GeneID:10924"
                     /db_xref="HGNC:HGNC:17389"
                     /translation="MALVRALVCCLLTAWHCRSGLGLPVAPAGGRNPPPAIGQFWHVT
                     DLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFDFIKNSGQEA
                     SFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQL
                     PVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYYGPNI
                     MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKLI
                     DIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNNPG
                     IRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA
                     KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK
                     HNY"
BASE COUNT          538 a          356 c          341 g          524 t
ORIGIN      
        1 ctcaggcctg acggtccgag tggagctgcg ggacagcccg aacctccagg tcagccccgc
       61 ggccctccat ggcgctggtg cgcgcactcg tctgctgcct gctgactgcc tggcactgcc
      121 gctccggcct cgggctgccc gtggcgcccg caggcggcag gaatcctcct ccggcgatag
      181 gacagttttg gcatgtgact gacttacact tagaccctac ttaccacatc acagatgacc
      241 acacaaaagt gtgtgcttca tctaaaggtg caaatgcctc caaccctggc ccttttggag
      301 atgttctgtg tgattctcca tatcaactta ttttgtcagc atttgatttt attaaaaatt
      361 ctggacaaga agcatctttc atgatatgga caggggatag cccacctcat gttcctgtac
      421 ctgaactctc aacagacact gttataaatg tgatcactaa tatgacaacc accatccaga
      481 gtctctttcc aaatctccag gttttccctg cgctgggtaa tcatgactat tggccacagg
      541 atcaactgcc tgtagtcacc agtaaagtgt acaatgcagt agcaaacctc tggaaaccat
      601 ggctagatga agaagctatt agtactttaa ggaaaggtgg tttttattca cagaaagtta
      661 caactaatcc aaaccttagg atcatcagtc taaacacaaa cttgtactac ggcccaaata
      721 taatgacact gaacaagact gacccagcca accagtttga atggctagaa agtacattga
      781 acaactctca gcagaataag gagaaggtgt atatcatagc acatgttcca gtggggtatc
      841 tgccatcttc acagaacatc acagcaatga gagaatacta taatgagaaa ttgatagata
      901 tttttcaaaa atacagtgat gtcattgcag gacaatttta tggacacact cacagagaca
      961 gcattatggt tctttcagat aaaaaaggaa gtccagtaaa ttctttgttt gtggctcctg
     1021 ctgttacacc agtgaagagt gttttagaaa aacagaccaa caatcctggt atcagactgt
     1081 ttcagtatga tcctcgtgat tataaattat tggatatgtt gcagtattac ttgaatctga
     1141 cagaggcgaa tctaaaggga gagtccatct ggaagctgga gtatatcctg acccagacct
     1201 acgacattga agatttgcag ccggaaagtt tatatggatt agctaaacaa tttacaatcc
     1261 tagacagtaa gcagtttata aaatactaca attacttctt tgtgagttat gacagcagtg
     1321 taacatgtga taagacatgt aaggcctttc agatttgtgc aattatgaat cttgataata
     1381 tttcctatgc agattgcctc aaacagcttt atataaagca caattactag tatttcacag
     1441 tttttgctaa tagaaaatgc tgattctgat tctgagatca atttgtggga attttacata
     1501 aatctttgtt aattactgag tgggcaagta gacttcctgt ctttgctttc tttttttttt
     1561 ctttttgatg ccttaatgta gatatcttta tcattctgaa ttgtattata tatttaaagt
     1621 gctcattaat agaatgatgg atgtaaattg gatgtaaata ttcagtttat ataattatat
     1681 ctaatttgta cccttgttga aattgtcatt tatacaataa agcgaattct ttatctctaa
     1741 aaaaaaaaaa aaaaaaaaa
//