LOCUS BC018953 1112 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 2, mRNA (cDNA clone
IMAGE:4303183), partial cds.
ACCESSION BC018953
VERSION BC018953.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1112)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1112)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC018953.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: o Column: 23.
FEATURES Location/Qualifiers
source 1..1112
/db_xref="H-InvDB:HIT000038488"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4303183"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1112
/gene="SMARCD2"
/gene_synonym="BAF60B"
/gene_synonym="CRACD2"
/gene_synonym="PRO2451"
/gene_synonym="Rsc6p"
/db_xref="GeneID:6603"
/db_xref="MIM:601736"
CDS <1..237
/gene="SMARCD2"
/gene_synonym="BAF60B"
/gene_synonym="CRACD2"
/gene_synonym="PRO2451"
/gene_synonym="Rsc6p"
/codon_start=1
/product="SMARCD2 protein"
/protein_id="AAH18953.2"
/db_xref="GeneID:6603"
/db_xref="MIM:601736"
/translation="RDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRAAF
YHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT"
BASE COUNT 229 a 269 c 324 g 290 t
ORIGIN
1 agagatttca tgctcagttt tagcaccgac ccccaggact tcatccagga atggctccgt
61 tcccagcgcc gagacctcaa gatcatcact gatgtgattg gaaatcctga ggaggagaga
121 cgagctgctt tctaccacca gccctgggcc caggaagcag taggcaggca catctttgcc
181 aaggtgcagc agcgaaggca ggaactggaa caggtgctgg gaattcgcct gacctaactg
241 ctcagggatc tttcttccca gccctggagc ctggagggag accaccctct gggtccttgc
301 tggggccgca gacacgtagg ctggggtgag gagtgtctgc tgtcaccctc tactctccag
361 ctttagtttt ataaatgtag tgataggatt ccttgttgct tggtccccaa agccttatac
421 tttttgcatt ggctttaatt gggttcagca gatgcctcct ctgcccccct gcaggcaggc
481 ccaagtagga ctgctggagg ctgtgctttg acattgtaag acatttccga accaaaggct
541 gctgggtttg catgtttaca gactccccct ggggcgaggg tcagagctgg ctctggggag
601 ctgggctagg aagaggaggt gcagcccaga ctcttcctag cctttctaaa ccaaagttct
661 ttgccattcc tacaagccca gccttgctgc tggttttttc ctttcctttg ggtatttgca
721 ctattttggg agcaagtttt ctatgtggga gccacttttt ttgtacaggg gtaagttggg
781 ggttttcagg gagcctgtta ggtgcctcct tcttttcttt cctcaatcta tgcaagcggc
841 tctggccgcc atcatctcct gggatgccag agggctgcct ctccagcggc ttgggccggg
901 gaggggacac tccagttctc tagcatggcc tgaggtatgg ggtatgtgca tgtggaggcc
961 agggtaaggt gaatggggag gctgggagga ctggtgttgc cctttggagc ttggtgagga
1021 gggtgggcct agggcttggc gagtgccaca tctggcaggt ttggaaattt ccaaataaat
1081 ccttttgtct aaaaaaaaaa aaaaaaaaaa aa
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