LOCUS BC018939 2623 bp mRNA linear HUM 24-FEB-2004
DEFINITION Homo sapiens cartilage intermediate layer protein 2, mRNA (cDNA
clone IMAGE:4126917), partial cds.
ACCESSION BC018939
VERSION BC018939.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2623)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2623)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC018939.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: f Column: 6.
FEATURES Location/Qualifiers
source 1..2623
/db_xref="H-InvDB:HIT000089818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4126917"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2623
/gene="CILP2"
/gene_synonym="CLIP-2"
/gene_synonym="MGC45771"
/db_xref="GeneID:148113"
CDS <1..1964
/gene="CILP2"
/gene_synonym="CLIP-2"
/gene_synonym="MGC45771"
/codon_start=3
/product="CILP2 protein"
/protein_id="AAH18939.2"
/db_xref="GeneID:148113"
/translation="AYQGDFTIEVPPSTQRLVVTFVDPSGEFMDAVRVLPFDPRGAGV
YHEVKAMRKKAPVILHTSQSNTIPLGELEDEAPLGELVLPSGAFRRADGKPYSGPVEA
RVTFVDPRDLTSAASAPSDLRFVDSDGELAPLRTYGMFSVDLRAPGSAEQLQVGPVAV
RVAASQIHMPGHVEALKLWSLNPETGLWEEESGFRREGSSGPRVRREERVFLVGNVEI
RERRLFNLDVPERRRCFVKVRAYANDKFTPSEQVEGVVVTLVNLEPAPGFSANPRAWG
RFDSAVTGPNGACLPAFCDADRPDAYTALVTATLGGEELEPAPSLPRPLPATVGVTQP
YLDRLGYRRTDHDDPAFKRNGFRINLAKPRPGDPAEANGPVYPWRSLRECQGAPVTAS
HFRFARVEADKYEYNVVPFREGTPASWTGDLLAWWPNPQEFRACFLKVKIQGPQEYMV
RSHNAGGSHPRTRGQLYGLRDARSVRDPERPGTSAACVEFKCSGMLFDQRQVDRTLVT
IMPQGSCRRVAVNGLLRDYLTRHPPPVPAEDPAAFSMLAPLDPLGHNYGVYTVTDQSP
RLAKEIAIGRCFDGSSDGFSREMKADAGTAVTFQCREPPAGRPSLFQRLLESPATALG
DIRREMSEAAQAQARASGPLRTRRGRVRQ"
BASE COUNT 439 a 878 c 837 g 469 t
ORIGIN
1 ccgcctacca gggcgacttt accattgagg tgccgccctc cacccagcgg ctggtggtga
61 cttttgtgga ccccagcggt gagttcatgg acgctgtccg ggtcttgcct tttgatcctc
121 gaggtgccgg cgtgtaccac gaggtcaagg ccatgcggaa gaaagccccg gtcattttac
181 ataccagcca gagcaacacg atccccctgg gcgagctgga agatgaggcg cccctgggcg
241 agctggtcct gccttctggc gctttccgca gagccgacgg caaaccctac tcggggcctg
301 tggaggcccg ggtgacgttc gtggaccccc gagacctcac ctcggcggcg tctgccccca
361 gtgacctgcg cttcgtggac agcgacggcg agctggctcc actgcgcacc tacggcatgt
421 tctccgtgga cctccgtgcg cccggctccg cggagcagct gcaggtgggg ccggtggccg
481 tgcgggtggc cgccagccag atccacatgc caggccacgt ggaggccctc aagctgtggt
541 cgctgaaccc cgagaccggc ttgtgggagg aggagagcgg cttccggcgc gaggggtcct
601 cgggcccccg ggtgcgccgg gaggagcgcg tcttcctggt gggcaacgtg gagatccggg
661 agcggcgcct gttcaatctg gacgtgcctg agcgccgccg ctgcttcgtg aaggtgcgcg
721 cctacgccaa cgacaagttc acccccagcg agcaggtgga gggcgtggtg gtcacgctgg
781 tcaatctgga gcccgccccc ggcttctccg ccaacccccg tgcctggggc cgctttgaca
841 gcgcggtcac cggccccaat ggcgcctgcc tccccgcctt ctgcgacgcc gacaggccag
901 acgcctacac cgccctggtc accgccaccc tgggcggcga ggagctggag ccggcccctt
961 ccttgccccg cccactcccg gccaccgtgg gcgtcaccca gccctacctg gacaggctgg
1021 ggtaccgtcg gacggaccac gacgatcccg ccttcaagcg taacggcttc cgcatcaacc
1081 tcgccaagcc caggccaggt gaccccgccg aggccaatgg gcctgtgtac ccgtggcgca
1141 gcctgcggga atgccagggg gccccggtga ctgccagcca cttccgcttc gccagggtgg
1201 aggcggacaa gtacgagtac aacgtggtcc ccttccgaga gggcacacct gcctcctgga
1261 ctggcgatct cctggcctgg tggcccaacc cgcaggagtt ccgggcctgc ttcctcaagg
1321 tgaagatcca gggtccccag gagtatatgg tccgctccca caacgcaggg ggcagccacc
1381 cacgcacccg cggccagctc tacggacttc gggatgcccg gagtgtgcga gaccccgagc
1441 gtccgggcac ctcggcagcc tgcgtggagt tcaagtgcag cgggatgctg ttcgaccagc
1501 ggcaggtgga caggacgctg gtgaccatta tgccccaggg cagctgccgg cgcgtggccg
1561 tcaacggact ccttcgggat tacctgaccc ggcacccccc accggtgccc gcggaggacc
1621 cagctgcctt ctccatgctg gcccccctag accctctggg ccacaactat ggcgtctaca
1681 ctgtcactga ccagagccca cgcttggcca aggagatcgc cattggccgc tgctttgatg
1741 gttcctctga cggcttctcc agagagatga aggctgatgc cggcacagcc gtcaccttcc
1801 agtgccggga gccaccggcc ggacgaccca gcctcttcca gaggctgctg gagtccccgg
1861 cgacagcact tggtgacatc cgcagggaga tgagcgaggc ggcgcaggca caggcccggg
1921 cctcaggtcc cctccgcacc cgccggggta gggtccggca gtgacctggg caggggcctc
1981 gctttcccac ctccctccag actcctttga ccccaggaag ttttgcccct ccttcttctc
2041 cagacagccc cctccccagg tgtctgggtc ccctttcccg cccctttcca gaactcagag
2101 tcagacaaga acccagagca tccgatggta gaaacaccag gaagacaatt gttgctgtgt
2161 ggtatggaat ggagtttgcg gtgactctgg ggccagcacc caggggacga cgttcaaccc
2221 tagcctgaag ggacccgctc ccagctcaga agccgtctct gacttctcgt gcgtattttg
2281 accctgattt caatcttcta cccttgggag ttctggcgtt tggcacaaag tcccctctgc
2341 ctgtttggag ctcagtgcta gaccaggtcc cctgccccga gctttgtttt tggggttatt
2401 tattgaaaca aagtgtgggg agctggttgt gggtgtgagt gggggtgtgg ggtccaggct
2461 gggcccagtg aaaaggagga aggggttccc atgcggggga ggctctgggg ctgaggggaa
2521 caattctcac gtgtttggtg cttagagacc tgcccggggc gttgggcagg ccctccgggg
2581 gctgaattaa aaatgcttta tttccaaaaa aaaaaaaaaa aaa
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