LOCUS BC018785 1510 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 29, mRNA (cDNA clone
MGC:32109 IMAGE:4875646), complete cds.
ACCESSION BC018785
VERSION BC018785.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1510)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1510)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: m Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51873032.
FEATURES Location/Qualifiers
source 1..1510
/db_xref="H-InvDB:HIT000038458"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32109 IMAGE:4875646"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1510
/gene="LRRC29"
/gene_synonym="FBL9"
/db_xref="GeneID:26231"
/db_xref="HGNC:HGNC:13605"
CDS 426..1097
/gene="LRRC29"
/gene_synonym="FBL9"
/codon_start=1
/product="leucine rich repeat containing 29"
/protein_id="AAH18785.1"
/db_xref="GeneID:26231"
/db_xref="HGNC:HGNC:13605"
/translation="MYSSGWPAGAAEPRHGRGRELAQALGCMHGAPSQLASLSLAHCS
SLKSRPELEHQASGTKDACPEPQGPSLLTLRALQELDLTACSKLTDASLAKVLQFLQL
RQLSLSLLPELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLS
SCSQLIEQTLDAIGQACRQLRVLDVATCPGINMAAVRRFQAQLPQVSCVQSRFVGGAD
LTLTL"
BASE COUNT 294 a 493 c 427 g 296 t
ORIGIN
1 gttcctcctt tgggccactc tgtcccttta gcttggggga ccgtcctccc cttccctatc
61 ggccccagaa gatagctgcc ctgtcatctc cgcgagaaca ggccctctgc ccatcccctt
121 cccttgaagt ggctgtctcc tccccgctca gttctggaag atgtccgctc catctcatcg
181 tcccgaagga tgctcacata tattctgagc ttcctgcctc tgtcagatca gaaagaggcc
241 tccctcgtga gttgggcttg gtaccgtgct gcccagaatg cccttcggga gcaaccaggc
301 cttacctccc tggacctcag tggctgctca gaactgactg atggggcgct cttggccgtg
361 agccggggcc tgcggcacct gcggcgcctg agcctgggga agctgcagcg gctgacagat
421 gcaggatgta cagctctggg tggcctgcag gagctgcaga gcctcgacat ggccgagggc
481 gggaactggc ccaggccctg ggctgtatgc acggggctcc atcccagctg gcctccctca
541 gcctggccca ctgctcttca ttgaagtcac gcccagagct ggagcatcag gcctcaggta
601 ccaaggacgc ctgtccagag ccacagggcc cctccctgct cacgctgcgg gccctgcagg
661 agttggacct cacagcctgc agcaagctga ctgatgccag tttagccaag gtgctccagt
721 ttctccagct gaggcagctg tcccttagcc tgttgccaga actcacagac aacggcttgg
781 ttgctgtggc caggggctgt cctagcctgg agcacttggc gctgagtcac tgcagccgac
841 tcagtgacaa gggctgggcc caggcagcca gctcctggcc aaggctgcag catctcaacc
901 tgtccagctg cagtcagctc atagagcaga cactggatgc tattgggcag gcgtgcaggc
961 agctccgggt gttggatgtg gccacgtgcc ctggcatcaa catggccgcc gtcagacgct
1021 tccaagccca gctgccccag gtgtcctgtg tccagtcccg cttcgtggga ggggctgacc
1081 tgaccctaac actctgaggc cagaccctct aggactgggg gtggggccaa tccagggcag
1141 cccagaggga acatcctgcc acaccgcctg gcagtagcct ctttccagct acacgtcgct
1201 gccacaggcc cctggaaatg ctacctacgt gttgccgcca caggctcctg ctctctggcc
1261 aagccctggg tgggaggcca ggcccccagc gggcagggtc tggtgctggg aggagcagag
1321 cctctgcctc ttgcctgccc tcctctcaga cctaaggccg ggctccacct actcctgtgg
1381 gactctccca gcaccctgtg tgcactgagc ttcagcagct gagcctaggt ctgtgctgta
1441 aatcctaaga ttaaacattc cagatagtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa
//