LOCUS BC018781 1772 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens ATP synthase mitochondrial F1 complex assembly factor
1, mRNA (cDNA clone MGC:32078 IMAGE:4870683), complete cds.
ACCESSION BC018781
VERSION BC018781.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1772)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1772)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: k Column: 24.
FEATURES Location/Qualifiers
source 1..1772
/db_xref="H-InvDB:HIT000038455"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32078 IMAGE:4870683"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1772
/gene="ATPAF1"
/gene_synonym="ATP11"
/gene_synonym="ATP11p"
/gene_synonym="FLJ22351"
/gene_synonym="MGC88060"
/db_xref="GeneID:64756"
/db_xref="HGNC:HGNC:18803"
/db_xref="MIM:608917"
CDS 35..1021
/gene="ATPAF1"
/gene_synonym="ATP11"
/gene_synonym="ATP11p"
/gene_synonym="FLJ22351"
/gene_synonym="MGC88060"
/codon_start=1
/product="ATP synthase mitochondrial F1 complex assembly
factor 1"
/protein_id="AAH18781.1"
/db_xref="GeneID:64756"
/db_xref="HGNC:HGNC:18803"
/db_xref="MIM:608917"
/translation="MAAVVVAAAGGAGPAVLQVAGLYRGLCAVRSRALGLGLVSPAQL
RVFPVRPGSGRPEGGADGSGVGAEAELQANPFYDRYRDKIQLLRRSDPAAFESRLEKR
SEFRKQPVGHSRQGDFIKCVEQKTDALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEE
IKQIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVGQWTGTE
LHFTALINIQTRGEAAASQLILYHYPELKEEKGIVLMTAEMDSTFLNVAEAQCIANQV
QLFYATDRKETYGLVETFNLRPNEFKYMSVIAELEQSGLGAELKCAQNQNKT"
BASE COUNT 494 a 403 c 452 g 423 t
ORIGIN
1 cgcgcctgag gaggaggagg aggcgggggc ggccatggct gctgtggtgg tggcggctgc
61 gggtggcgcg ggaccggcgg tcctgcaggt ggccggtctc taccggggcc tgtgcgcggt
121 gcgcagccgc gccctgggcc tggggctcgt gtcacccgcg cagctgcgcg tcttcccagt
181 gcgccccggc tcgggccggc ccgagggggg cgccgacggc agcggggtcg gggccgaggc
241 cgagctccag gccaaccctt tctacgaccg ctaccgcgac aagatccagc tgctgcgcag
301 gtcagaccca gctgcttttg agtcccgcct ggagaaacgc agtgaatttc ggaagcagcc
361 agtggggcat tccaggcaag gtgattttat caaatgtgtg gaacagaaga cagatgcctt
421 ggggaaacag tctgtgaaca gaggattcac taaggacaag actctcagtt caatctttaa
481 cattgagatg gtaaaagaaa aaactgcaga agaaataaaa cagatttggc agcaatattt
541 tgcagcaaaa gatacagtct acgcagttat tcctgcagaa aagtttgatt tgatctggaa
601 ccgggctcag tcctgtccaa catttctatg tgctctgcca agaagggaag gttatgagtt
661 ttttgtagga caatggacag gtactgaact ccacttcact gcacttataa atattcagac
721 ccgaggggaa gctgcagcca gccagctgat tttatatcac tatcctgaac ttaaggaaga
781 aaagggcata gtgctgatga ctgcagaaat ggattccaca tttctgaatg ttgctgaggc
841 acagtgcatc gccaaccaag ttcagctctt ctacgctact gatcggaaag agacctacgg
901 gttagtggag acctttaacc tcagaccaaa tgagttcaaa tatatgtctg tcatcgctga
961 attggagcaa agcggacttg gagcagaact gaaatgtgcc cagaaccaaa ataagactta
1021 gaactgtaca ggttggccct tcacctagtt gactcagccc tcgatagtct agagcccacc
1081 ccctcctcag gaactcaaga gctcagcatt tataatgagc agttggtaat gagttgccct
1141 atgtgcttgt cgcaagcagt cacagagatg agccctatta cttgatattc aggaacaaag
1201 gtacctgaac attctgataa ttatctcagc atacttgagg tttccttttt taagtgttcg
1261 aggttataac aagagacagc caaggaccta caagacagtt gacttgattt tgcacagtgt
1321 aacagcgcag ttgcattctg gccactttga ccttatagct cccaaatgat gagtttgtca
1381 tctttatgaa ctcatgacag gataataagc ttgaagacct gctgtagtta gatatgggct
1441 ttaatccttc ccatgcacca gtcagctgaa caaaagcata agccaaacat cctgtttaaa
1501 ctgtagaata accagatatt cccatcaggt taaagacttc atctagatga tgccccccag
1561 agatgccttt agtgtaagta gctggcttgg ggtatcagca aatttcaggt atagttagat
1621 aaacaggtac agggcctgca tactattaaa ccatagtttg tggcacccgc ttttctaact
1681 ccacctgtta gaagctatgt gtttgaagga atgaatcagt gcagtataaa taaaattctt
1741 ttgtaaggag aaaaaaaaaa aaaaaaaaaa aa
//