LOCUS       BC018775                3250 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens sorting nexin 33, mRNA (cDNA clone MGC:32065
            IMAGE:4869639), complete cds.
ACCESSION   BC018775
VERSION     BC018775.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3250)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 40 Row: k Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23397573.
FEATURES             Location/Qualifiers
     source          1..3250
                     /db_xref="H-InvDB:HIT000038452"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:32065 IMAGE:4869639"
                     /tissue_type="Skin, melanotic melanoma, high MDR."
                     /clone_lib="NIH_MGC_49"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..3250
                     /gene="SNX33"
                     /gene_synonym="SH3PXD3C"
                     /gene_synonym="SNX30"
                     /db_xref="GeneID:257364"
                     /db_xref="HGNC:HGNC:28468"
     CDS             97..1821
                     /gene="SNX33"
                     /gene_synonym="SH3PXD3C"
                     /gene_synonym="SNX30"
                     /codon_start=1
                     /product="sorting nexin 33"
                     /protein_id="AAH18775.1"
                     /db_xref="GeneID:257364"
                     /db_xref="HGNC:HGNC:28468"
                     /translation="MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNS
                     RGETGLFPASYVEIVRSGISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSGF
                     LSNQGSFEEDDDDDWDDWDDGCTVVEEPRAGGLGTNGHPPLNLSYPGAYPSQHMAFRP
                     KPPLERQDSLASAKRGSVVGRNLNRFSCFVRSGVEAFILGDVPMMAKIAETYSIEMGP
                     RGPQWKANPHPFACSVEDPTKQTKFKGIKSYISYKLTPTHAASPVYRRYKHFDWLYNR
                     LLHKFTVISVPHLPEKQATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLS
                     CLDDKQWKMGKRRAEKDEMVGASFLLTFQIPTEHQDLQDVEDRVDTFKAFSKKMDDSV
                     LQLSTVASELVRKHVGGFRKEFQKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTY
                     EAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGRM
                     VQDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEK
                     TLRMYDNL"
BASE COUNT          693 a          978 c          896 g          683 t
ORIGIN      
        1 attcagctgc gagtgcattc ttggactgcc ttgtgagcat ccccggtctg ggcaggaccc
       61 tctccttccc atctttctat accacccagc ccagccatgg cactgaaagg ccgagccctc
      121 tatgactttc acagtgagaa caaggaggaa atcagcatcc agcaggatga ggacctggtc
      181 atctttagcg agacctcact ggatggctgg ctgcagggcc agaacagccg tggggagaca
      241 gggctctttc ctgcctctta tgtggagatc gtccgttctg gcatcagcac caaccatgct
      301 gactactcca gcagccctgc aggctctccc ggagcccagg tgagcttgta caacagcccc
      361 agtgtggcca gcccagctag gagtggtggg ggcagtggct tcctctcaaa ccagggtagc
      421 tttgaggagg atgatgatga tgactgggat gactgggacg acggatgcac agtggtggag
      481 gagccacggg ctggtgggct gggcaccaac gggcaccctc ccctcaacct ctcctaccct
      541 ggtgcctacc ccagccagca catggccttc cggcccaagc caccactgga gcggcaggac
      601 agcctggcat ctgccaagcg aggcagtgtg gtgggccgta acctcaaccg tttctcatgc
      661 tttgtgcgtt ctggagtgga ggccttcatc ctgggtgatg tgcccatgat ggccaagatc
      721 gctgagacat actccattga aatgggccct cgtggccccc agtggaaggc caatccccac
      781 ccatttgcct gctctgtgga ggaccccaca aaacagacca aattcaaggg catcaaaagc
      841 tacatctcct acaagctcac acccacccat gctgcctcac ccgtctaccg gcgctacaaa
      901 cactttgact ggctctataa ccgcctgcta cacaagttca ctgtcatctc ggtgccccac
      961 ctgcctgaga agcaggccac tggccgcttc gaggaggact tcatcgaaaa gcggaagcgg
     1021 agactcatcc tctggatgga ccacatgacc agccaccctg tgctctccca gtacgaaggc
     1081 ttccagcatt tcctcagctg cctggatgac aagcagtgga agatgggcaa acgccgggcg
     1141 gagaaggatg agatggtggg tgccagcttc ctgctcacct tccagatccc caccgagcac
     1201 caggacttgc aggacgtgga agatcgcgtg gacactttca aggccttcag taagaagatg
     1261 gacgacagcg tcctgcagct cagcactgtg gcatcagagc tggtgcgtaa acatgtgggg
     1321 ggcttccgca aggaattcca gaagctgggc agtgccttcc aggccatcag tcattccttc
     1381 cagatggacc cccccttttg ctctgaggcc ctcaacagtg ccatttctca cacgggccgt
     1441 acctatgaag ccatcgggga gatgtttgct gagcagccca agaatgacct cttccagatg
     1501 ctggacacac tgtctctcta ccagggcctg ctctccaact tccctgacat catccatcta
     1561 caaaaaggcg ccttcgccaa ggtgaaggag agccaacgca tgagtgacga gggccgcatg
     1621 gtgcaggacg aggcagacgg cattcgcagg cgctgccgcg tggtgggttt cgccctgcag
     1681 gccgagatga accacttcca ccagcgccgt gagctcgact tcaagcacat gatgcagaac
     1741 tacttgcgcc agcagatcct cttctaccag cgggtgggcc agcagctgga gaagaccctg
     1801 cgcatgtatg acaacctctg accgcgtgtg cctgggcccc ctccttcccc tgggcctggt
     1861 cactgcagtg taccccactt tcccgacctc cctataccag cagtgactgg gggaggggtc
     1921 agcggtgggg gagataagcg gcctgtcctg cctcctggga gaaggagctt tcaaggagtc
     1981 atgggtgccc ctgggaaatt ccccactcct tagaagtggg gcacagcagg ggtgagaata
     2041 gagtcaggag ccctcgaggc caaggcctgg gctgccggtc agtcagtgaa ggtcaggcca
     2101 gggtctcagc ctcccctaga gcctattttg cttgctcacc tggccactgc tgccttatcc
     2161 attcagcaga caccgaggcc tgctgcaccc ttgggtcgga tgctgggcac ccagggctgt
     2221 gacatgcctg ctcttcagga gtcctcagtg aaggtcgggg tcagacacag acagagtcaa
     2281 tgcagtatga ctgatgttta agtgagggat ttctggaagc tcatagaagg gaccacagca
     2341 ttccactggt cagggaagac tccatagagt aggcaacatt tgggcagtgt tttgaagaat
     2401 gacaagggcc tgccagacag tacatggggg agaaggactt tcaggggaga ggaacagcat
     2461 gggcaaagtt atggaggcat gcaaacatct ccctcttctc tcccttactt tccaagcaag
     2521 ttaggtacgc tttccatggg gattctggcc tgtgtggtag gaagggatct cccttgctcc
     2581 catgttgctg gctgtccgta catcaccctg tcccctgcag gagggggcta caggccatct
     2641 ccctcctgta ggcctctgac tcccctccac ttttgggccc tcagcttatc tcgggcaggg
     2701 gaccattgca gcatcctccc ctcctcggac tcaaggtgct gaggtataag ccctgggccc
     2761 cagatccctg gtgacacctt cctggagaag actctcaaaa gtgactgtat atttgagttc
     2821 accagcaata actccccaca ctcgaagcag gtccaaaccc aggatctcag ggtccttggg
     2881 ctctgtggca ctgtcttccc aagatccttc ctgttgcaca atgggaaacc taagaggaaa
     2941 aagacagggg cctgcttgcc cagccatgcg agggattcca tgcccacctg ccctctgtct
     3001 gcctcgctgg aatgtgggcc cctgctcccc gtcaggttgt gctgtctctg acctatgttt
     3061 acatccccga ggggtttctg cctcctcccc acccaggtca gggtgtggtc cagcagcttg
     3121 ctgtggggtg ctgacatgtg tcaccactgc cccccttgcc cccggggggg tcatggtctc
     3181 ctcctggatg ctgctccttg aatctttttt cttgataaac cttttacaat taaaaaaaaa
     3241 aaaaaaaaaa
//