LOCUS BC018760 2220 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone MGC:31978 IMAGE:4300396), complete cds. ACCESSION BC018760 VERSION BC018760.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2220) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2220) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: c Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 26024192. FEATURES Location/Qualifiers source 1..2220 /db_xref="H-InvDB:HIT000089702" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:31978 IMAGE:4300396" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_42" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2220 /gene="SNAP47" /gene_synonym="HEL170" /gene_synonym="SNAP-47" /gene_synonym="SVAP1" /db_xref="GeneID:116841" /db_xref="HGNC:HGNC:30669" CDS 254..1648 /gene="SNAP47" /gene_synonym="HEL170" /gene_synonym="SNAP-47" /gene_synonym="SVAP1" /codon_start=1 /product="synaptosomal-associated protein, 47kDa" /protein_id="AAH18760.2" /db_xref="GeneID:116841" /db_xref="HGNC:HGNC:30669" /translation="MRAARRGLHCAGAERPRRRGRLWDSSGVPQRQKRPGPWRTQTQE QMSRDVCIHTWPCTYYLEPKRRWVTGQLSLTSLSLRFMTDSTGEILVSFPLSSIVEIK KEASHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLLSQPGAVADASVP RTRGEELTGLMAGSQKRLEDTARVLHHQGQQLDSVMRGLDKMESDLEVADRLLTELES PAWWPFSSKLWKTPPETKPREDVSMTSCEPFGKEGILIKIPAVISHRTESHVKPGRLT VLVSGLEIHDSSSLLMHRFEREDVDDIKVHSPYEISIRQRFIGKPDMAYRLISAKMPE VIPILEVQFSKKMELLEDALVLRSARTSSPAEKSCSVWHAASGLMGCTLHREPPAGDQ EGTALHLQTSLPALSEADTQELTQILRRMKGLALEAESELERQDEALDGVAAAVDRAT LTIDKHNRRMKRLT" BASE COUNT 505 a 634 c 651 g 430 t ORIGIN 1 gaaggcgccc ggctccgaga cgaaggctac ccggcccgga gcctggccga cgccggggac 61 atcgaccccc aggcctcgga agtggctgtc ggcgagggcg cgcgtctcgc ggtccatcca 121 gctcagcacg ggtcgaagga ccctcctcct cacttccgcc ggagcggaaa cggtgaggac 181 cagcctcgga accagaagac gcagggcgcc gcgtttctgc cccaccagcg cctggggctc 241 cgggcctgca cgcatgcgcg cggctcgccg cggtcttcac tgcgcaggcg ccgagcggcc 301 gaggcgccgc ggtcggctct gggactcgtc tggcgtccct cagaggcaga agaggcctgg 361 accttggcgc acacagaccc aggaacagat gagcagggat gtctgcatcc acacctggcc 421 gtgcacctac tacctggagc ccaagaggcg atgggttact ggacagctgt ccttaacatc 481 gctgtcgctc aggttcatga ctgacagcac tggagagatt ctggtcagct tccccctctc 541 cagcatagtt gagatcaaga aggaggcttc acattttatc ttcagctcca tcaccatcct 601 ggagaagggc catgccaagc actggttcag ctccctgcgg ccaagtcgaa atgtggtctt 661 cagcatcatc gagcatttct ggagggagct gctgctgtct cagcctggag ccgtggcaga 721 cgcatctgtc ccaaggaccc ggggcgagga gctgacggga ctcatggctg gatcccagaa 781 acgcctggag gacacggcga gggtcctgca ccaccagggc cagcagctgg acagcgtcat 841 gagaggcctg gacaagatgg agtcagacct ggaggtggcg gacagattgc tgacagaact 901 ggaatctcct gcttggtggc cctttagctc caagctttgg aagacaccac cggaaacaaa 961 gcccagggaa gatgtctcca tgaccagttg tgaacccttt gggaaagaag ggatactgat 1021 aaaaattcct gctgttattt cccacagaac agagtctcac gttaaaccag ggaggctcac 1081 cgtccttgtg tctgggttgg aaatacatga ctccagttct ttgctcatgc acaggtttga 1141 aagagaagac gtggacgaca tcaaggtcca ctcaccttac gaaattagca tccgccagcg 1201 gtttattgga aagccagaca tggcctatcg tttgatatct gccaagatgc cagaggttat 1261 ccccatttta gaagtgcagt tcagcaagaa gatggagctg ttagaagatg cattggtgct 1321 cagaagcgca agaacctctt cccccgcaga gaagagctgc tcagtctggc atgcagcatc 1381 tgggctgatg ggctgtaccc tgcaccgtga gccacccgca ggagaccagg agggcacagc 1441 actgcacctg cagacaagcc tgccagccct ttctgaggca gatacccagg aactaaccca 1501 gatcctgagg aggatgaagg ggctggccct ggaggccgag agtgagctgg agagacaaga 1561 cgaagccctg gatggcgttg cagcagctgt ggacagggca accttgacca tcgacaagca 1621 caacaggcgg atgaagaggc tgacctaggg gcagaacgtc cctgcattcc tgtctcaccc 1681 tgcacatccc gctgagatgg agggctgggc ggcagtgcca gggctgcaga ggcctgtggc 1741 cctccggagt ggtcttcctc tggatggggc tgctactgtg gggctgcttc tgcaccaggg 1801 gcctccccag gtgtgcacca tgcctgcctc ccacttggct gtccctgctg ctgggcagga 1861 cccggccaca tgttctgcgg atgctgcaga agtgtggacc atggcgggac cccaaggaca 1921 cttggcacag gcctggaaga ggccgccctc gtcttgtctc ggctcccttt catggacaga 1981 ctggccttct tagctgtact ataaatttgt gagtgaagtt agagcccagc tcacttagcc 2041 agctcacttt gagggcatcc tataaacacc caactgttct tttatcgtct cggttttagc 2101 caaaagtgaa attagcatga ctgcatcttt caaacaaaaa tattgatttc tgcttttagg 2161 gccccgtttc catccagaaa taaagggaaa tgctggcttc aaaaaaaaaa aaaaaaaaaa //