LOCUS BC018746 3799 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens eukaryotic translation initiation factor 4 gamma, 2,
mRNA (cDNA clone MGC:31927 IMAGE:4299481), complete cds.
ACCESSION BC018746
VERSION BC018746.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3799)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3799)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: c Column: 21.
FEATURES Location/Qualifiers
source 1..3799
/db_xref="H-InvDB:HIT000089696"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31927 IMAGE:4299481"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3799
/gene="EIF4G2"
/gene_synonym="AAG1"
/gene_synonym="DAP5"
/gene_synonym="NAT1"
/gene_synonym="p97"
/db_xref="GeneID:1982"
/db_xref="HGNC:HGNC:3297"
/db_xref="MIM:602325"
CDS 296..3019
/gene="EIF4G2"
/gene_synonym="AAG1"
/gene_synonym="DAP5"
/gene_synonym="NAT1"
/gene_synonym="p97"
/codon_start=1
/transl_except=(pos:296..298,aa:Met)
/product="eukaryotic translation initiation factor 4
gamma, 2"
/protein_id="AAH18746.1"
/db_xref="GeneID:1982"
/db_xref="HGNC:HGNC:3297"
/db_xref="MIM:602325"
/translation="MESAIAEGGASRFSASSGGGGSRGAPQHYPKTAGNSEFLGKTPG
QNAQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLN
VGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQS
TTFRRLLISKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGELG
KLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHERAKSLMDQ
YFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAVKDL
GVFIPAPMAQGMRSDFFLEGPFMPPRMKMDRDPLGGLADMFGQMPGSGIGTGPGVIQD
RFSPTMGRHRSNQLFNGHGGHIMPPTQSQFGEMGGKFMKSQGLSQLYHSQSQGLLSQL
QGQSKDMPPRFSKKGQLNADEISLRPAQSFLMNKNQVPKLQPQITMIPPSAQPPRTQT
PPLGQTPQLGLKTNPPLIQEKPAKTSKKPPPSKEELLKLTETVVTEYLNSGNANEAVN
GVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEGIATSDNFMQAFLN
VLDQCPKLEVDIPLVKSYLAQFAARAIISELVSISELAQPLESGTHFPLFLLCLQQLA
KLQDREWLTELFQQSKVNMQKMLPEIDQNKDRMLEILEGKGLSFLFPLLKLEKELLKQ
IKLDPSPQTIYKWIKDNISPKLHVDKGFVNILMTSFLQYISSEVNPPSDETDSSSAPS
KEQLEQEKQLLLSFKPVMQKFLHDHVDLQVSALYALQVHCYNSNFPKGMLLRFFVHFY
DMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWLETAEEEESEEEAD"
BASE COUNT 1150 a 821 c 817 g 1011 t
ORIGIN
1 cggagctcta tggaggtggc agcgggtacc gagtggcggc tgcagcagcg actcctctga
61 gctgagtttg aggccgtccc cgactccttc ctcccccttc cctccccctt ttttttgttt
121 tccgttcccc tttcccctcc cttccctatc cccgacgacc ggatcctgag gaggcagctg
181 cggtggcagc tgctgagttc tcggtgaagg tatttcattt ctcctgtccc ctcccctccc
241 caccccatct attaatatta ttcttttgaa gattcttcgt tgtcaagccg ccaaagtgga
301 gagtgcgatt gcagaagggg gtgcttctcg tttcagtgct tcttcgggcg gaggaggaag
361 taggggtgca cctcagcact atcccaagac tgctggcaac agcgagttcc tggggaaaac
421 cccagggcaa aacgctcaga aatggattcc tgcacgaagc actagacgag atgacaactc
481 cgcagcaaac aactccgcaa acgaaaaaga acgacatgat gcaatcttca ggaaagtaag
541 aggcatacta aataagctta ctcctgaaaa gtttgacaag ctatgccttg agctcctcaa
601 tgtgggtgta gagtctaaac tcatccttaa aggggtcata ctgctgattg tggacaaagc
661 cctagaagag ccaaagtata gctcactgta tgctcagcta tgtctgcgat tggcagaaga
721 tgcaccaaac tttgatggcc cagcagcaga gggtcaacca ggacagaagc aaagcaccac
781 attcagacgc ctcctaattt ccaaattaca agatgaattt gaaaaccgaa ctagaaatgt
841 tgatgtctat gataagcgtg aaaatcccct cctccccgag gaggaggaac agagagccat
901 tgctaagatc aagatgttgg gaaacatcaa attcattgga gagcttggca agcttgatct
961 tattcacgaa tctatccttc ataagtgcat caaaacactt ttggaaaaga agaagagagt
1021 ccaactcaaa gatatgggag aggatttgga gtgcctctgt cagataatga ggacagtggg
1081 acctagatta gaccatgaac gagccaagtc cttaatggat cagtactttg cccgaatgtg
1141 ctccttgatg ttaagtaagg aattgccagc aaggattcgt ttcctgctgc aggataccgt
1201 agagttgcga gaacaccatt gggttcctcg caaggctttt cttgacaatg gaccaaagac
1261 gatcaatcaa attcgtcaag atgcagtaaa agatctaggg gtgtttattc ctgctcctat
1321 ggctcaaggg atgagaagtg acttctttct ggagggaccg ttcatgccac ccaggatgaa
1381 aatggatagg gacccacttg gaggacttgc tgatatgttt ggacaaatgc caggtagcgg
1441 aattggtact ggtccaggag ttatccagga tagattttca cccaccatgg gacgtcatcg
1501 ttcaaatcaa ctcttcaatg gccatggggg acacatcatg cctcccacac aatcgcagtt
1561 tggagagatg ggaggcaagt ttatgaaaag ccaggggcta agccagctct accatagcca
1621 gagtcaggga ctcttatccc agctgcaagg acagtcgaag gatatgccac ctcggttttc
1681 taagaaagga cagcttaatg cagatgagat tagcctgagg cctgctcagt cgttcctaat
1741 gaataaaaat caagtgccaa agcttcagcc ccagataact atgattcctc ctagtgcaca
1801 accaccacgc actcaaacac cacctctggg acagacacct cagcttggtc tcaaaactaa
1861 tccaccactt atccaggaaa agcctgccaa gaccagcaaa aagccaccac cgtcaaagga
1921 agaactcctt aaactaactg aaactgttgt gactgaatat ctaaatagtg gaaatgcaaa
1981 tgaggctgtc aatggtgtaa gagaaatgag ggctcctaaa cactttcttc ctgagatgtt
2041 aagcaaagta atcatcctgt cactagatag aagcgatgaa gataaagaaa aagcaagttc
2101 tttgatcagt ttactcaaac aggaagggat agccacaagt gacaacttca tgcaggcttt
2161 cctgaatgta ttggaccagt gtcccaaact ggaggttgac atccctttgg tgaaatccta
2221 tttagcacag tttgcagctc gtgccatcat ttcagagctg gtgagcattt cagaactagc
2281 tcaaccacta gaaagtggca cccattttcc tctcttccta ctttgtcttc agcagttagc
2341 taaattacaa gatcgagaat ggttaacaga actttttcaa caaagcaagg tcaatatgca
2401 gaaaatgctc ccagaaattg atcagaataa ggaccgcatg ttggagattt tggaaggaaa
2461 gggactgagt ttcttattcc cactcctcaa attggagaag gaactgttga agcaaataaa
2521 gttggatcca tcccctcaaa ccatatataa atggattaaa gataacatct ctcccaaact
2581 tcatgtagat aaaggatttg tgaacatctt aatgactagc ttcttacagt acatttctag
2641 tgaagtaaac ccccccagcg atgaaacaga ttcatcctct gctccttcca aagaacagtt
2701 agagcaggaa aaacaactac tactatcttt caagccagta atgcagaaat ttcttcatga
2761 tcacgttgat ctacaagtca gtgccctgta tgctctccag gtgcactgct ataacagcaa
2821 cttcccaaaa ggcatgttac ttcgcttttt tgtgcacttc tatgacatgg aaattattga
2881 agaagaagct ttcttggctt ggaaagaaga tataacccaa gagtttccgg gaaaaggcaa
2941 ggctttgttc caggtgaatc agtggctaac ctggttagaa actgctgaag aagaagaatc
3001 agaggaagaa gctgactaaa gaaccagcca aagccttaaa ttgtgcaaaa catactgttg
3061 ctatgatgta actgcatttg acctaaccac tgcgaaaatt cattccgctg taatgttttc
3121 acaatattta aagcagaagc acgtcagtta ggatttcctt ctgcataagg tttttttgta
3181 gtgtaatgtc ttaatcatag tctaccatca aatattttag gagtatcttt aatgtttaga
3241 tagtatatta gcagcatgca ataattacat cataagttct caagcagagg cagtctattg
3301 caaggacctt ctttgctgcc agttatcata ggctgtttta agttagaaaa ctgaatagca
3361 acactgaata ctgtagaaat gcactttgct cagtaatact tgagttgttg caatatttga
3421 ttatccattt ggttgttaca gaaaaattct taactgtaat tgatggttgt tgccgtaata
3481 gtatattgcc tgtatttcta cctctagtaa tgggctttat gtgctagatt ttaatatcct
3541 tgagcctggg caagtgcaca agtcttttta aaagaaacat ggtttacttg cacaaaactg
3601 atcagttttg agagatcgtt aatgcccttg aagtggtttt tgtgggtgtg aaacaaatgg
3661 tgagaatttg aattggtccc tcctattata gtattgaaat taagtctact taatttatca
3721 agtcatgttc atgccctgat tttatatact tgtatctatc aataaacatt gtgatacttg
3781 aaaaaaaaaa aaaaaaaaa
//