LOCUS BC018736 2106 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens viral DNA polymerase-transactivated protein 6, mRNA
(cDNA clone MGC:31863 IMAGE:4845423), complete cds.
ACCESSION BC018736
VERSION BC018736.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2106)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2106)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661597.
FEATURES Location/Qualifiers
source 1..2106
/db_xref="H-InvDB:HIT000038430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31863 IMAGE:4845423"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2106
/gene="LOC26010"
/gene_synonym="DKFZp564A2416"
/gene_synonym="DNAPTP6"
/db_xref="GeneID:26010"
CDS 109..1575
/gene="LOC26010"
/gene_synonym="DKFZp564A2416"
/gene_synonym="DNAPTP6"
/codon_start=1
/product="LOC26010 protein"
/protein_id="AAH18736.1"
/db_xref="GeneID:26010"
/translation="MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAV
QAFVDGSAIQVLKEWNMTGKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQI
QNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQR
CTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTA
RQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKA
QIMLCGEITHPKNNYSSRTPCSSLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAAN
PKMVSSLPSTADPSHQTMPANKQNGSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPL
GKGNSRHEHRRQPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEKPRRRQHAADTSEA
RPFRGSVGRVSQCNLCPTRIEVSTDAAVLSVPAVTLVA"
BASE COUNT 668 a 484 c 489 g 465 t
ORIGIN
1 gggagcgagg ggcgccggct ggggtgtgtg ctcctgagct cttcagaaac caggctgctt
61 tcaggaacat tgctgtggat tcccagggcc tattccgcta gaagcaagat ggctgaactc
121 aatactcatg tgaatgtcaa ggaaaagatc tatgcagtta gatcagttgt tcccaacaaa
181 agcaataatg aaatagtcct ggtgctccaa cagtttgatt ttaatgtgga taaagccgtg
241 caagcctttg tggatggcag tgcaattcaa gttctaaaag aatggaatat gacaggaaag
301 aagaacaata aaagaaaaag aagcaagtcc aagcagcatc aaggcaacaa agatgctaaa
361 gacaaggtgg agaggcctga ggcagggccc ctgcagccgc agccaccaca gattcaaaac
421 ggccccatga atggctgcga gaaggacagc tcgtccacag attctgctaa cgaaaaacca
481 gcccttatcc ctcgtgagaa aaagatctcg atacttgagg aaccttcaaa ggcacttcgt
541 ggggtcacag gcccaaatat tgagaaatca gtgaaggatt tgcaacgctg caccgtttct
601 ctaactagat atcgcgtcat gattaaggaa gaagtggata gttccgtgaa gaagatcaaa
661 gctgcctttg ctgaattaca caactgcatc attgacaaag aagtttcatt aatggcagaa
721 atggataaag ttaaagaaga agccatggaa atcctgactg ctcgtcagaa gaaagcagaa
781 gaactaaaga gactcactga ccttgccagt cagatggcag agatgcagct ggccgaactc
841 agggcagaaa ttaagcactt tgtcagcgag cgtaaatatg acgaggagct cgggaaagct
901 gcccggtttt cctgtgacat cgaacagctg aaggcccaaa tcatgctctg cggagaaatt
961 acacatccaa agaacaacta ttcctcaaga actccctgca gctccctgct gcctctgctg
1021 aatgcgcacg cagcaacctc tgggaaacag agtaactttt cccgaaaatc atccactcac
1081 aataagccct ctgaaggcaa agcggcaaac cccaaaatgg tgagcagtct ccccagcacc
1141 gccgacccct ctcaccagac catgccggcc aacaagcaga atggatcttc taaccaaaga
1201 cggagattta atccacagta tcataacaac aggctaaatg ggcctgccaa gtcgcagggc
1261 agtgggaatg aagccgagcc actgggaaag ggcaacagcc gccacgaaca cagaagacag
1321 ccgcacaacg gcttccggcc caaaaacaaa ggcggtgcca aaaatcaaga ggcttccttg
1381 gggatgaaga cccccgaggc cccggcccat tctgaaaagc cccggcgaag gcagcacgct
1441 gcagacacct cggaggccag gcccttccgg ggtagtgtcg gtagggtttc acagtgcaat
1501 ctctgcccca cgagaataga agtttccaca gatgcagcag ttctctcagt cccggctgtg
1561 acgttggtgg cctgagctag gaggaaaaag agcagttttc actcagtttt ggttccctgc
1621 ccgaggtgct gacccaattc gctgccaaaa gagtgtcaat cagaatatac aaatcccgta
1681 tggttgtgtc atcctctctt aatcattttt actaattcta ataatcagct ctagcttgct
1741 tcataatttt catggctttg cttgatctgt tgatgctttc tctcatcaag actttgcagc
1801 attttagcca ggcagtattt actcattatt aggaaaatca agatgtggct gaagatcaga
1861 ggctcagtta gcaacctgtg ttgtagcagt gatgtcagtc cattgattgt ctttagagag
1921 ttaatgttac aaaaaagaat tcttaataat cagacaaaca tgatctgctg aggacacatg
1981 cgcttttgta gaatttaaca tctggtgttt ttctgaaaaa atatatatac atatattgct
2041 ttatttgaaa caaattaaaa tatgctgcat ttgaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaa
//