LOCUS BC018722 1796 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens alveolar soft part sarcoma chromosome region,
candidate 1, mRNA (cDNA clone MGC:31811 IMAGE:4640076), complete
cds.
ACCESSION BC018722
VERSION BC018722.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1796)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1796)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: g Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17572803.
FEATURES Location/Qualifiers
source 1..1796
/db_xref="H-InvDB:HIT000038421"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31811 IMAGE:4640076"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1796
/gene="ASPSCR1"
/gene_synonym="ASPCR1"
/gene_synonym="ASPL"
/gene_synonym="ASPS"
/gene_synonym="RCC17"
/gene_synonym="TUG"
/db_xref="GeneID:79058"
/db_xref="HGNC:HGNC:13825"
/db_xref="MIM:606236"
CDS 3..1664
/gene="ASPSCR1"
/gene_synonym="ASPCR1"
/gene_synonym="ASPL"
/gene_synonym="ASPS"
/gene_synonym="RCC17"
/gene_synonym="TUG"
/codon_start=1
/product="alveolar soft part sarcoma chromosome region,
candidate 1"
/protein_id="AAH18722.1"
/db_xref="GeneID:79058"
/db_xref="HGNC:HGNC:13825"
/db_xref="MIM:606236"
/translation="MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQD
FNPCEYDLKFQRSVLDLSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGS
RLQDSFCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLG
LTGGSATIRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDA
DTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSP
GGPSKPKKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQ
AWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVA
LRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLF
QANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPD
PAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR"
BASE COUNT 374 a 562 c 577 g 283 t
ORIGIN
1 aaatggcggc cccggcaggc ggcggaggct ccgcggtgtc ggtgctggcc ccgaacggcc
61 ggcgccacac ggtgaaggtg acgccgagca ccgtgctgct tcaggttctg gaggacacgt
121 gccggcggca ggacttcaac ccctgtgaat atgatctgaa gtttcagagg agcgtgctcg
181 acctttctct ccagtggaga tttgccaacc tgcccaacaa tgccaagctg gagatggtgc
241 ccgcttcccg gagccgtgag gggcctgaga acatggttcg catcgctttg cagctggacg
301 atggctcgag gttgcaggac tctttctgtt caggccagac cctctgggag cttctcagcc
361 attttccaca gatcagggag tgcctgcagc accccggcgg ggccacccca gtctgcgtgt
421 acacgaggga tgaggtgacg ggtgaagctg ccctgcgggg cacgacgctg cagtcgctgg
481 gcctgaccgg gggcagcgcc accatcaggt ttgtcatgaa gtgctacgac cccgtgggca
541 agaccccagg aagcctgggc tcgtcagcgt cggctggcca ggcagccgcc agcgctccac
601 ttcccttgga atctggggag ctcagccgcg gcgacttgag ccgtccggag gacgcggaca
661 cctcagggcc ctgctgcgag cacactcagg agaagcagag cacaagggca cccgcagctg
721 ccccctttgt tcctttctcg ggtgggggac agagacaggg gggccctcct gggcccacga
781 ggcctctgac atcatcttca gctaagttgc cgaagtccct ctccagccct ggaggcccct
841 ccaagccaaa gaagtccaag tcgggccagg atccccagca ggagcaggag caggagcggg
901 agcgggatcc ccagcaggag caggagcggg agcggcccgt ggaccgggag cccgtggacc
961 gggagccggt ggtgtgccac cccgacctgg aggagcggct gcaggcctgg ccagcggagc
1021 tgcctgatga gttctttgag ctgacggtgg acgacgtgag aagacgcttg gcccagctca
1081 agagtgagcg gaagcgcctg gaagaagccc ccttggtgac caaggccttc agggaggcgc
1141 agataaagga gaagctggag cgctacccaa aggtggctct gagggtcctg ttccccgacc
1201 gctacgtcct acagggcttc ttccgcccca gcgagacagt gggggacttg cgagacttcg
1261 tgaggagcca cctggggaac cccgagctgt cattttacct gttcatcacc cctccaaaaa
1321 cagtcctgga cgaccacacg cagaccctct ttcaggcgaa cctcttcccg gccgctctgg
1381 tgcacttggg agccgaggag ccggcaggtg tctacctgga gcctggcctg ctggagcatg
1441 ccatctcccc atctgcggcc gacgtgctgg tggccaggta catgtccagg gccgccgggt
1501 ccccttcccc attgccagcc cctgaccctg cacctaagtc tgagccagct gctgaggagg
1561 gggcgctggt cccccctgag cccatcccag ggacggccca gcccgtgaag aggagcctgg
1621 gcaaggtgcc caagtggctg aagctgccgg ccagcaagag gtgagagctg ccagcctgag
1681 gtgcccactc cgccagccac aggaccacct cctctgccag caggaataaa gacttgtgca
1741 tccctcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//